RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TMEM71Q6P5X7 295 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 FOXR2Q6PJQ5 311 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 TTC7BQ86TV6 843 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 FJX1Q86VR8 437 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 ATP6V0D2Q8N8Y2 350 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 TP53I13Q8NBR0 393 aaPredicted RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 CCDC150Q8NCX0 1101 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 KIAA1524Q8TCG1 905 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 CXorf40AQ8TE69 158 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 CLEC4CQ8WTT0 213 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 ZDHHC1Q8WTX9 485 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 OR1E3Q8WZA6 343 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 RAB7BQ96AH8 199 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 HDAC11Q96DB2 347 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 SLC39A13Q96H72 371 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 BTN2A3PQ96KV6 586 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 WDR92Q96MX6 357 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 WRAP53Q9BUR4 548 aaKnown RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 ULBP3Q9BZM4 244 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 MIS12Q9H081 205 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 GSX1Q9H4S2 264 aaPredicted RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 ZDHHC6Q9H6R6 413 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 MLXIPLQ9NP71 852 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 FBXO8Q9NRD0 319 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 SPATS2LQ9NUQ6 558 aaKnown RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 TFIP11Q9UBB9 837 aaKnown RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 TSPAN16Q9UKR8 245 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 LIMCH1Q9UPQ0 1083 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 HS3ST2Q9Y278 367 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 COQ6Q9Y2Z9 468 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 PCDHGA9Q9Y5G4 932 aaKnown RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 OR51B4Q9Y5P0 310 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 MN1Q10571 1320 aaPredicted RBP7.27□□□□□ -1.24
VCAN-207ENST00000507162 CNTRLQ7Z7A1 2325 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ATRQ13535 2644 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 IGHV1OR21-1A0A087WYE8 117 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ZNF185O15231 689 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 PPM1DO15297 605 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ADCY5O95622 1261 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 FGF1P05230 155 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 C8BP07358 591 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CCNYL3P0C7X3 344 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CD19P15391 556 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 TIMP2P16035 220 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ZNF28P17035 718 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CAPN3P20807 821 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 HTR1EP28566 365 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CSF2RBP32927 897 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 STAT6P42226 847 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 GPR3P46089 330 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 SNRPFP62306 86 aaKnown RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 CLDN10P78369 228 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ART3Q13508 389 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 WSCD2Q2TBF2 565 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CARD16Q5EG05 197 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 FBXL22Q6P050 247 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 C22orf39Q6P5X5 142 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ZNF517Q6ZMY9 492 aaPredicted RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 EPM2AIP1Q7L775 607 aaPredicted RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 TAC4Q86UU9 113 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 ZNF295-AS1Q8N0V1 137 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 IRGQQ8WZA9 623 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 FAM149B1Q96BN6 582 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 STAMBPL1Q96FJ0 436 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 PDXPQ96GD0 296 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 PSMB7Q99436 277 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 DPYSL5Q9BPU6 564 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 SPON2Q9BUD6 331 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 C2orf49Q9BVC5 232 aaPredicted RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 MMRN2Q9H8L6 949 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CHST11Q9NPF2 352 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 CISHQ9NSE2 258 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 HECAQ9UBI9 543 aaPredicted RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 VPS51Q9UID3 782 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 G3BP2Q9UN86 482 aaKnown RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 PCDHGB7Q9Y5F8 929 aa7.27□□□□□ -1.25
VCAN-207ENST00000507162 NYNRINQ9P2P1 1898 aaKnown RBP7.27□□□□□ -1.25
VCAN-207ENST00000507162 ZNF106Q9H2Y7 1883 aaKnown RBP7.26□□□□□ -1.25
VCAN-207ENST00000507162 TRBV23OR9-2A0A075B6M9 112 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 SYNJ2BP-COX16A0A087WUM0 186 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 KCNU1A8MYU2 1149 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 F9P00740 461 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 PCCBP05166 539 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 FYNP06241 537 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 RHOCP08134 193 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 FECHP22830 423 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 SSTR2P30874 369 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 TXLNAP40222 546 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 IRAK1P51617 712 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 CCNHP51946 323 aaPredicted RBP7.26□□□□□ -1.25
VCAN-207ENST00000507162 ART1P52961 327 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 PTK2Q05397 1052 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 DNASE1L3Q13609 305 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 RAPSNQ13702 412 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 MAP7Q14244 749 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 ZNF805Q5CZA5 627 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 FAM26FQ5R3K3 315 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 TTC39BQ5VTQ0 682 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms