RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	TBATA	Q96M53	351 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	ZNF599	Q96NL3	588 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	PEBP4	Q96S96	227 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	WRAP53	Q9BUR4	548 aa	Known RBP	10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	NRSN2	Q9GZP1	204 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	HAUS2	Q9NVX0	235 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	UCKL1	Q9NWZ5	548 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	SEPT3	Q9UH03	358 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	APOBEC3B	Q9UH17	382 aa	Known RBP	10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	LHX6	Q9UPM6	363 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	DOLK	Q9UPQ8	538 aa		10.52	□□□□□ -0.73
NR1I3-222	ENST00000506018	WDFY3	Q8IZQ1	3526 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	PKD1L2	Q7Z442	2459 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TSPAN11	A1L157	253 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CFAP69	A5D8W1	941 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018		K7ESM1	405 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	MYO1F	O00160	1098 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TAF4	O00268	1085 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TPP1	O14773	563 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	INSIG1	O15503	277 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CAPNS1	P04632	268 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CASP14	P31944	242 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	SSR1	P43307	286 aa	Known RBP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	PEX5	P50542	639 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	AP1S1	P61966	158 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	PPARD	Q03181	441 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TBX2	Q13207	712 aa	Predicted RBP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CAMK2B	Q13554	666 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	LBR	Q14739	615 aa	Known RBP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	DPYSL2	Q16555	572 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	FAXC	Q5TGI0	409 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	E4F1	Q66K89	784 aa	Predicted RBP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	MACC1	Q6ZN28	852 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	NETO2	Q8NC67	525 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CCDC112	Q8NEF3	446 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TPCN2	Q8NHX9	752 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	LMX1A	Q8TE12	382 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	TEKT4	Q8WW24	435 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	DEPDC7	Q96QD5	511 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	PCDH12	Q9NPG4	1184 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CWC15	Q9P013	229 aa	Known RBP	10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	LCMT1	Q9UIC8	334 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	SALL4	Q9UJQ4	1053 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	ANAPC7	Q9UJX3	599 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	ATP8A1	Q9Y2Q0	1164 aa		10.51	□□□□□ -0.73
NR1I3-222	ENST00000506018	CHD6	Q8TD26	2715 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	SPINT1	O43278	529 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	GYPC	P04921	128 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ANXA6	P08133	673 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ALPI	P09923	528 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ELFN1	P0C7U0	828 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	KRT10	P13645	584 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	C6	P13671	934 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	CTSE	P14091	401 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	KEL	P23276	732 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	IGFALS	P35858	605 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	EIF4A3	P38919	411 aa	Known RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	SCNN1B	P51168	640 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	INSM1	Q01101	510 aa	Predicted RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	KRT81	Q14533	505 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	IRF4	Q15306	451 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ELOC	Q15369	112 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	NR0B2	Q15466	257 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	SMTNL2	Q2TAL5	461 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	CCDC122	Q5T0U0	273 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	AFMID	Q63HM1	303 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ESRP1	Q6NXG1	681 aa	Known RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ALKBH5	Q6P6C2	394 aa	Known RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	LRRC69	Q6ZNQ3	347 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	MARCH9	Q86YJ5	346 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	CAMK1D	Q8IU85	385 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	PHACTR4	Q8IZ21	702 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	SDR16C5	Q8N3Y7	309 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	FSTL5	Q8N475	847 aa	Predicted RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ATPAF2	Q8N5M1	289 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	ARFGAP1	Q8N6T3	406 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	NIPA2	Q8N8Q9	360 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	TSEN2	Q8NCE0	465 aa	Known RBP	10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	MAPK15	Q8TD08	544 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	PSKH2	Q96QS6	385 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	PANX2	Q96RD6	677 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	NUP85	Q9BW27	656 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	TRIM7	Q9C029	511 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	THAP2	Q9H0W7	228 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	KCTD5	Q9NXV2	234 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	RAX	Q9Y2V3	346 aa		10.5	□□□□□ -0.73
NR1I3-222	ENST00000506018	CFAP47	Q6ZTR5	3102 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	DMXL2	Q8TDJ6	3036 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	CACNB4	O00305	520 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	RRP8	O43159	456 aa	Known RBP	10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	MFAP3L	O75121	409 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	NEBL	O76041	1014 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	RASGRP1	O95267	797 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	MT-CO3	P00414	261 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	ACTN2	P35609	894 aa		10.49	□□□□□ -0.73
NR1I3-222	ENST00000506018	MMP12	P39900	470 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms