RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LDB2O43679 373 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ANXA9O76027 345 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 PIGNO95427 931 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 PSMB4P28070 264 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SSR1P43307 286 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 CNTN1Q12860 1018 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ARSIQ5FYB1 569 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 FRMD8Q9BZ67 464 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ETNK1Q9HBU6 452 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 NT5MQ9NPB1 228 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SCUBE2Q9NQ36 999 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 IGLV3-16A0A075B6K0 115 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ANKRD66B4E2M5 251 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 MID1O15344 667 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 EPN2O95208 641 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 FGF1P05230 155 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 EPHX1P07099 455 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 PDHA1P08559 390 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 C1SP09871 688 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ETS1P14921 441 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 NEK3P51956 506 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ST8SIA6P61647 398 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 PTSQ03393 145 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZC3H18Q86VM9 953 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRRN4Q8WUT4 740 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 VPS35Q96QK1 796 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 CIPCQ9C0C6 399 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 TRABDQ9H4I3 376 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 C10orf88Q9H8K7 445 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SHOC2Q9UQ13 582 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 C1QTNF3-AMACRE9PGA6 284 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 TMEM63AO94886 807 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SEC31AO94979 1220 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 HEXIM1O94992 359 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 MORF4L2Q15014 288 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 UGP2Q16851 508 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 DARS2Q6PI48 645 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC36A4Q6YBV0 504 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 KANSL1Q7Z3B3 1105 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 IQCHQ86VS3 1027 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 CCDC110Q8TBZ0 833 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 PPP1R16AQ96I34 528 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 KIFC1Q9BW19 673 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 AP1M1Q9BXS5 423 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 EVLQ9UI08 416 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 TCRBV7S3A2A0A539 114 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 RAD51CO43502 376 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SERPINA4P29622 427 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 VIPR1P32241 457 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 TRIM23P36406 574 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 XIAPP98170 497 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ANGPT1Q15389 498 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 HENMT1Q5T8I9 393 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ESRP1Q6NXG1 681 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 ABI3BPQ7Z7G0 1075 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 TMPRSS6Q8IU80 811 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC41A1Q8IVJ1 513 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 OR2T34Q8NGX1 318 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 NEUROG2Q9H2A3 272 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 KCTD5Q9NXV2 234 aa8.33□□□□□ -1.08
CDC42SE2-208ENST00000505065 NDC80O14777 642 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 HRO43593 1189 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 ALDH1A2O94788 518 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CD6P30203 668 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC8A1P32418 973 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 NNMTP40261 264 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TUBB4BP68371 445 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SPAG17Q6Q759 2223 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CRTC1Q6UUV9 634 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CHPFQ8IZ52 775 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRRN4CLQ8ND94 238 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SPATA22Q8NHS9 363 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 ATG2BQ96BY7 2078 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 RBM15Q96T37 977 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 ERP44Q9BS26 406 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 NPIPB15A6NHN6 443 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 METTL12A8MUP2 240 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 AP3B1O00203 1094 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CPP00450 1065 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SERPINF2P08697 491 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TGM1P22735 817 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CD86P42081 329 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 WNT3AP56704 352 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CDK18Q07002 472 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZNF235Q14590 738 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CNGA3Q16281 694 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 KIAA0895LQ68EN5 471 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 PDPK2PQ6A1A2 396 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SDE2Q6IQ49 451 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CNTN4Q8IWV2 1026 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 BBS5Q8N3I7 341 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CCDC33Q8N5R6 958 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TRIM44Q96DX7 344 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SIGLEC10Q96LC7 697 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 PLEKHG4BQ96PX9 1271 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 INSM2Q96T92 566 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms