RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ETFBKMTQ8IXQ9 262 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CYP4X1Q8N118 509 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 NDUFAF2Q8N183 169 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CPA6Q8N4T0 437 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 SLC25A41Q8N5S1 370 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PPM1NQ8N819 430 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 OR2AP1Q8NGE2 309 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CALML6Q8TD86 181 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 HCAR2Q8TDS4 363 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 STYXQ8WUJ0 223 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 SCG3Q8WXD2 468 aaKnown RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 NXPE3Q969Y0 559 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CENPTQ96BT3 561 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 MFSD3Q96ES6 412 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CERS2Q96G23 380 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 MYADMQ96S97 322 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PAFAH2Q99487 392 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CPNE1Q99829 537 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PHF7Q9BWX1 381 aaPredicted RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 TDRD1Q9BXT4 1180 aaKnown RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 TRABDQ9H4I3 376 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 ATP13A3Q9H7F0 1226 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 MAGEE1Q9HCI5 957 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 TREX1Q9NSU2 369 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PIH1D1Q9NWS0 290 aaKnown RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 DEC1Q9P2X7 70 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 EPS15L1Q9UBC2 864 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PLA2G4CQ9UP65 541 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CHKBQ9Y259 395 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 FCF1Q9Y324 198 aaKnown RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 PPIL1Q9Y3C6 166 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PCDHGC4Q9Y5F7 938 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 TTC24A2A3L6 582 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 C2orf81A6NN90 581 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 CXorf49A8MYA2 514 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 WASH3PC4AMC7 463 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 K7ERQ8 282 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 SMAD6O43541 496 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 TULP3O75386 442 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 MT-ND3P03897 115 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 DLDP09622 509 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 KRT15P19012 456 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 NMBRP28336 390 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 GBP2P32456 591 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 SPRP35270 261 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 CHRNA4P43681 627 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 POLR2LP62875 67 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 CBX1P83916 185 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 ACVR1Q04771 509 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 POU6F1Q14863 301 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 EIF4HQ15056 248 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 TAF1AQ15573 450 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 FUT11Q495W5 492 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 ACCSLQ4AC99 568 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 ARMC12Q5T9G4 340 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 KIAA0930Q6ICG6 404 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 ESRP1Q6NXG1 681 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 TRMT10BQ6PF06 316 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 TRABD2AQ86V40 505 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 NAT16Q8N8M0 369 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 SUSD6Q92537 303 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 ZNF669Q96BR6 464 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 RMDN1Q96DB5 314 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 LRIG1Q96JA1 1093 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 RPL10LQ96L21 214 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 TRMT61BQ9BVS5 477 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 EBF3Q9H4W6 596 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 PPANQ9NQ55 473 aaKnown RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 SMYD2Q9NRG4 433 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 ELOVL2Q9NXB9 296 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 PSD3Q9NYI0 1048 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 TXNDC16Q9P2K2 825 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 HECAQ9UBI9 543 aaPredicted RBP10.21□□□□□ -0.77
DDX41-203ENST00000504781 TBK1Q9UHD2 729 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 PHTF1Q9UMS5 762 aa10.21□□□□□ -0.77
DDX41-203ENST00000504781 C5orf42Q9H799 3197 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 LOC730098B7Z3J9 87 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 ANHXE9PGG2 379 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 TRAFD1O14545 582 aaPredicted RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 LDB2O43679 373 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 PGLSO95336 258 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 ERVK-10P10266 1014 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 BRAFP15056 766 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 ARSAP15289 507 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 LPOP22079 712 aaPredicted RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 SERPINA4P29622 427 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 GP5P40197 560 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 RECQLP46063 649 aaPredicted RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 GRIA4P48058 902 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 ARCN1P48444 511 aaKnown RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 PTPN5P54829 565 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 CSE1LP55060 971 aaKnown RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 ST8SIA6P61647 398 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 THOC5Q13769 683 aaKnown RBP10.2□□□□□ -0.78
DDX41-203ENST00000504781 CNGA3Q16281 694 aa10.2□□□□□ -0.78
DDX41-203ENST00000504781 UGP2Q16851 508 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms