RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PRKCGP05129 697 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ACADMP11310 421 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 CAMK2GQ13555 558 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 MILR1Q7Z6M3 343 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 MIER2Q8N344 545 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 CLCA2Q9UQC9 943 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 A0A087X1B8 175 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ABHD14A-ACY1A0A1B0GW23 586 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 FKBP9O95302 570 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 PROCP04070 461 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 CYP2A6P11509 494 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ARHGDIAP52565 204 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 PPIDQ08752 370 aaKnown RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 RTP2Q5QGT7 225 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 FAM45BPQ6NSW5 357 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 FKBP9P1Q75LS8 142 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 DCBLD1Q8N8Z6 715 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 FAM45AQ8TCE6 357 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 MCOLN3Q8TDD5 553 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 TLCD1Q96CP7 247 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 MYO19Q96H55 970 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 PANX3Q96QZ0 392 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 SYT11Q9BT88 431 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ZNF358Q9NW07 568 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 SMCHD1A6NHR9 2005 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 FFAR3O14843 346 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 GPR42O15529 346 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 CACHD1Q5VU97 1274 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ALYREFQ86V81 257 aaKnown RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ZFYVE1Q9HBF4 777 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 IGSF9Q9P2J2 1179 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 GNG14A0A1W2PPG7 69 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 PEX11AO75192 247 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 DNAJC8O75937 253 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 CCND1P24385 295 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 NFYCQ13952 458 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 PTK2BQ14289 1009 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 TRIM48Q8IWZ4 208 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 ZDHHC14Q8IZN3 488 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 STK40Q8N2I9 435 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 CSGALNACT1Q8TDX6 532 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 ELMO1Q92556 727 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 SMG9Q9H0W8 520 aaKnown RBP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 TCAF1Q9Y4C2 921 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 BPGMP07738 259 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 FAM163BP0C2L3 166 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 SOAT1P35610 550 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 MAPK8P45983 427 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 NDST2P52849 883 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 FPGSQ05932 587 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 ZBTB17Q13105 803 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 TEDDM1Q5T9Z0 273 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 SMOC2Q9H3U7 446 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 BCORQ6W2J9 1755 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 TBL3Q12788 808 aaKnown RBP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 INPP5AQ14642 412 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 CYTH1Q15438 398 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 ADGRF1Q5T601 910 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 ICE2Q659A1 982 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 BNC2Q6ZN30 1099 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 SLC44A2Q8IWA5 706 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-207ENST00000504761 EFCAB3Q8N7B9 438 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 SH3RF2Q8TEC5 729 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 IGSF21Q96ID5 467 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 OSBPL2Q9H1P3 480 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 DEC1Q9P2X7 70 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 ZNHIT2Q9UHR6 403 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 LNPEPQ9UIQ6 1025 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 SCML2Q9UQR0 700 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 BTRCQ9Y297 605 aa14.16□□□□□ -0.14
TCOF1-207ENST00000504761 INSIG1O15503 277 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 VAV1P15498 845 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 IL10RBQ08334 325 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 PGS1Q32NB8 556 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 RAET1GQ6H3X3 334 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 DSG4Q86SJ6 1040 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 OR56A4Q8NGH8 313 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 C8orf48Q96LL4 319 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 HAUS8Q9BT25 410 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 TMEM109Q9BVC6 243 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 WDR55Q9H6Y2 383 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 PARVBQ9HBI1 364 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 ABCB8Q9NUT2 735 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 KCNK4Q9NYG8 393 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 TMEM216Q9P0N5 145 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 APPL1Q9UKG1 709 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 INSL6Q9Y581 213 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 CLUHO75153 1309 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 TK2O00142 265 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 USP1O94782 785 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 EPB42P16452 691 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 MAPKAPK2P49137 400 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 KCNJ2P63252 427 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 UBAP2LQ14157 1087 aaKnown RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 FASTKQ14296 549 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms