RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 INSIG1O15503 277 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 NKX2-8O15522 239 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 MTSS1O43312 755 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 B4GAT1O43505 415 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 BUB1O43683 1085 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 SMC2O95347 1197 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 PIGNO95427 931 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 GSRP00390 522 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 F9P00740 461 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 FGF3P11487 239 aaPredicted RBP9.2□□□□□ -0.94
CCDC171-209ENST00000498725 TIMP2P16035 220 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 SLC9A1P19634 815 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 NR1D1P20393 614 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 ARSDP51689 593 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 RAD51Q06609 339 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 RAB6CQ53S08 254 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 COBLL1Q53SF7 1204 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 EFHC2Q5JST6 749 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 CERCAMQ5T4B2 595 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 SPECC1LQ69YQ0 1117 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 FOXR2Q6PJQ5 311 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 ZNF783Q6ZMS7 281 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 NRSN1Q8IZ57 195 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 NELFBQ8WX92 580 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 ARHGEF2Q92974 986 aaKnown RBP9.2□□□□□ -0.94
CCDC171-209ENST00000498725 ISG20Q96AZ6 181 aaKnown RBP9.2□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM159Q96B96 161 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 RNF31Q96EP0 1072 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 EXOC2Q96KP1 924 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 C1orf74Q96LT6 269 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 CCDC74BQ96LY2 380 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 GSDMAQ96QA5 445 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 NCAPGQ9BPX3 1015 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 OSBPL1AQ9BXW6 950 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 MAGEB5Q9BZ81 275 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 RAB6CQ9H0N0 254 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM168Q9H0V1 697 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 PDCL3Q9H2J4 239 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 CYP4F12Q9HCS2 524 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 RRN3Q9NYV6 651 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 ZNF212Q9UDV6 495 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 APPL1Q9UKG1 709 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 HPCAL4Q9UM19 191 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 CLEC18AA5D8T8 446 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 RHPN2P1A8MT19 583 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ZNF891A8MT65 544 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 TOR1BO14657 336 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 TMCC1O94876 653 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 CPNE6O95741 557 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 IGSF6O95976 241 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 CD82P27701 267 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 UGT1A3P35503 534 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 FLT3P36888 993 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 PEX5P50542 639 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 MLLT10P55197 1068 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 SNX16P57768 344 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 RHOAP61586 193 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ATP11AP98196 1134 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 B4GALNT1Q00973 533 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 PTK2Q05397 1052 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 BIRC2Q13490 618 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 SERINC3Q13530 473 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 HLTFQ14527 1009 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 CDO1Q16878 200 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 DEFB109BQ30KR1 87 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 SLC25A52Q3SY17 297 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ARTNQ5T4W7 220 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 NKAIN2Q5VXU1 208 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 TTI2Q6NXR4 508 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 CLEC18BQ6UXF7 455 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 FAM129CQ86XR2 697 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 IRF2BP1Q8IU81 584 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 TRIM59Q8IWR1 403 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 UNC5BQ8IZJ1 945 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 PAF1Q8N7H5 531 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 CLEC18CQ8NCF0 446 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ATL2Q8NHH9 583 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 VOPP1Q96AW1 172 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ABHD17AQ96GS6 310 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 GDAP1L1Q96MZ0 367 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 TAAR9Q96RI9 348 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 RBM15Q96T37 977 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 FGF22Q9HCT0 170 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 SLC39A1Q9NY26 324 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 PLEKHB1Q9UF11 243 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 AJAP1Q9UKB5 411 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 PCDHGC3Q9UN70 934 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 ZDHHC9Q9Y397 364 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 B3GALT1Q9Y5Z6 326 aa9.19□□□□□ -0.94
CCDC171-209ENST00000498725 TNRC6AQ8NDV7 1962 aaKnown RBP9.19□□□□□ -0.94
CCDC171-209ENST00000498725 IGHV5-10-1A0A0J9YXX1 117 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 A8MX80 341 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-209ENST00000498725 FAM72CH0Y354 149 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 BIN1O00499 593 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TEX33O43247 280 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms