RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 LRRC10BA6NIK2 292 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 LRRC72A6NJI9 287 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 LRRIQ3A6PVS8 624 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 LGALS16A8MUM7 142 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 MASP2O00187 686 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 PDE2AO00408 941 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 OAS1P00973 400 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 TNNC2P02585 160 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 TPM3P06753 285 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 TRIM49P0CI25 452 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 TRIM49CP0CI26 452 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 FGF3P11487 239 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 ATP1A3P13637 1013 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 KCNE1P15382 129 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 LPOP22079 712 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 GTF2H1P32780 548 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 UBASH3AP57075 661 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 DLG4P78352 724 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 TFAMQ00059 246 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 MYL7Q01449 175 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 CETN1Q12798 172 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 CHAF1BQ13112 559 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 BIRC3Q13489 604 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 ZNF235Q14590 738 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 PDCD2Q16342 344 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 DDR2Q16832 855 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 DUOXA2Q1HG44 320 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 VWA3BQ502W6 1294 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 ZNF542PQ5EBM4 170 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 JADE1Q6IE81 842 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 LINC00114Q6XXX2 140 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 NT5DC4Q86YG4 428 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 WDR49Q8IV35 697 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 NLGN4XQ8N0W4 816 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 PPM1NQ8N819 430 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 ZNF366Q8N895 744 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 TMEM102Q8N9M5 508 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 NLGN4YQ8NFZ3 816 aaPredicted RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 PLEKHO2Q8TD55 490 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 SLC35C1Q96A29 364 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 CCDC74AQ96AQ1 378 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 ANKRD36BP1Q96IX9 119 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 XPO6Q96QU8 1125 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 BBS2Q9BXC9 721 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 CPEB1Q9BZB8 566 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 RASSF4Q9H2L5 321 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 PABPC3Q9H361 631 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 NDST4Q9H3R1 872 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 GRPEL1Q9HAV7 217 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 TMEM8AQ9HCN3 771 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 SRA1Q9HD15 236 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 FGF21Q9NSA1 209 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 INTS13Q9NVM9 706 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 IFNKQ9P0W0 207 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 FBXO10Q9UK96 956 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 UBQLN1Q9UMX0 589 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 SLC27A6Q9Y2P4 619 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 R3HCC1Q9Y3T6 440 aaKnown RBP5.3□□□□□ -1.56
FXN-205ENST00000498653 C2CD2Q9Y426 696 aa5.3□□□□□ -1.56
FXN-205ENST00000498653 SACSQ9NZJ4 4579 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 SLC12A8A0AV02 714 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 H7C1Q1 480 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 PMM2O15305 246 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 P4HA2O15460 535 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
FXN-205ENST00000498653 NID1P14543 1247 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 IGFBP2P18065 325 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 CYP3A5P20815 502 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 IL4RP24394 825 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 PIK3CAP42336 1068 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 RECQLP46063 649 aaPredicted RBP5.29□□□□□ -1.56
FXN-205ENST00000498653 GCLMP48507 274 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 FMO5P49326 533 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 MXI1P50539 228 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 ADPRHP54922 357 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 MFAP3P55082 362 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 RBP5P82980 135 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 ADORA2A-AS1P86434 159 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 ATP11AP98196 1134 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 UBXN1Q04323 297 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 TRPC3Q13507 836 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 ERV3-1Q14264 604 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 PCOLCEQ15113 449 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 CHRNA6Q15825 494 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 ZBTB6Q15916 424 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 POM121L1PQ3SYA9 428 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 C1orf220Q5T0J3 134 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 KRT39Q6A163 491 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 SARM1Q6SZW1 724 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 SERPINA13PQ6UXR4 307 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 GBP6Q6ZN66 633 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 APTXQ7Z2E3 356 aaKnown RBP5.29□□□□□ -1.56
FXN-205ENST00000498653 TRAPPC11Q7Z392 1133 aa5.29□□□□□ -1.56
FXN-205ENST00000498653 DDX42Q86XP3 938 aaKnown RBP eCLIP5.29□□□□□ -1.56
FXN-205ENST00000498653 DTWD1Q8N5C7 304 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms