RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZNF354CQ86Y25 554 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 CCNJLQ8IV13 435 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 PYROXD2Q8N2H3 581 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 GPR156Q8NFN8 814 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 EPS8L1Q8TE68 723 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 PDXPQ96GD0 296 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 FOXJ2Q9P0K8 574 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 LHX3Q9UBR4 397 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 KLQ9UEF7 1012 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 MFHAS1Q9Y4C4 1052 aa16.21■□□□□ 0.19
MUC1-220ENST00000498431 C2CD4BA6NLJ0 364 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 TMX2-CTNND1H3BSU7 103 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 NVLO15381 856 aaKnown RBP16.2■□□□□ 0.18
MUC1-220ENST00000498431 SDC4P31431 198 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 HDAC4P56524 1084 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 RHOAP61586 193 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 CYP4F2P78329 520 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 RAD51Q06609 339 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 ZFP36L1Q07352 338 aaKnown RBP16.2■□□□□ 0.18
MUC1-220ENST00000498431 PLA2G15Q8NCC3 412 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 MSANTD4Q8NCY6 345 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 OR1E3Q8WZA6 343 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 HMCESQ96FZ2 354 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 TMEM74Q96NL1 305 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 RBM15Q96T37 977 aaKnown RBP eCLIP16.2■□□□□ 0.18
MUC1-220ENST00000498431 ARHGAP9Q9BRR9 750 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 RETREG1Q9H6L5 497 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 PCDH12Q9NPG4 1184 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 NOCTQ9UK39 431 aaKnown RBP16.2■□□□□ 0.18
MUC1-220ENST00000498431 PCDHGA4Q9Y5G9 962 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 RELNP78509 3460 aa16.2■□□□□ 0.18
MUC1-220ENST00000498431 ZSCAN5CA6NGD5 496 aaPredicted RBP16.19■□□□□ 0.18
MUC1-220ENST00000498431 TMEM110-MUSTN1A8MSY1 372 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 F8VZ95 297 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 ITGB2P05107 769 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 PRKCGP05129 697 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 PCCBP05166 539 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 PRKCSHP14314 528 aaPredicted RBP16.19■□□□□ 0.18
MUC1-220ENST00000498431 UCHL3P15374 230 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 CYTH1Q15438 398 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 CERCAMQ5T4B2 595 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 ZSWIM9Q86XI8 627 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 SLC30A5Q8TAD4 765 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 FAM172AQ8WUF8 416 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 HTR3CQ8WXA8 447 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 CENPIQ92674 756 aaPredicted RBP16.19■□□□□ 0.18
MUC1-220ENST00000498431 FUBP1Q96AE4 644 aaKnown RBP16.19■□□□□ 0.18
MUC1-220ENST00000498431 WDR92Q96MX6 357 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 C11orf70Q9BRQ4 267 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 TUBGCP2Q9BSJ2 902 aa16.19■□□□□ 0.18
MUC1-220ENST00000498431 TSPAN11A1L157 253 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 TMEM202A6NGA9 273 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 C9orf172C9J069 976 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 SUV39H1O43463 412 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 CYP1A1P04798 512 aaPredicted RBP16.18■□□□□ 0.18
MUC1-220ENST00000498431 CHRNB2P17787 502 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 MMP8P22894 467 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 XPAP23025 273 aaPredicted RBP16.18■□□□□ 0.18
MUC1-220ENST00000498431 HTR1BP28222 390 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 PTPN9P43378 593 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 LIG3P49916 1009 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 MAPK10P53779 464 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 ELP6Q0PNE2 266 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 TBR1Q16650 682 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 UGP2Q16851 508 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 TPD52L1Q16890 204 aaPredicted RBP16.18■□□□□ 0.18
MUC1-220ENST00000498431 INO80DQ53TQ3 878 aaPredicted RBP16.18■□□□□ 0.18
MUC1-220ENST00000498431 MANEAQ5SRI9 462 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 STRADAQ7RTN6 431 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 SPRED1Q7Z699 444 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 RTL3Q8N8U3 475 aaKnown RBP16.18■□□□□ 0.18
MUC1-220ENST00000498431 OR6C4Q8NGE1 309 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 USP7Q93009 1102 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 FGF22Q9HCT0 170 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 MRPL40Q9NQ50 206 aaKnown RBP16.18■□□□□ 0.18
MUC1-220ENST00000498431 APPL1Q9UKG1 709 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 DAAM1Q9Y4D1 1078 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 RNF215Q9Y6U7 377 aa16.18■□□□□ 0.18
MUC1-220ENST00000498431 RASA4BC9J798 803 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 RASA4O43374 803 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 BUB1BO60566 1050 aaPredicted RBP16.17■□□□□ 0.18
MUC1-220ENST00000498431 TNFP01375 233 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 GLB1P16278 677 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 EPHB2P29323 1055 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 MMP12P39900 470 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 FMO1Q01740 532 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 SRSF1Q07955 248 aaKnown RBP eCLIP16.17■□□□□ 0.18
MUC1-220ENST00000498431 PTP4A2Q12974 167 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 SERINC3Q13530 473 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 AGERQ15109 404 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 OGFOD3Q6PK18 319 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 XKR5Q6UX68 686 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 ATG14Q6ZNE5 492 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 TAF8Q7Z7C8 310 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 DTX1Q86Y01 620 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 SLITRK4Q8IW52 837 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 FAM46DQ8NEK8 389 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 CCL4L1Q8NHW4 92 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 CASKIN2Q8WXE0 1202 aa16.17■□□□□ 0.18
MUC1-220ENST00000498431 NTAN1Q96AB6 310 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms