RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CSTBP04080 98 aaKnown RBP3.84□□□□□ -1.79
SMC4-227ENST00000497984 TFPIP10646 304 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 MCM2P49736 904 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 NR0B1P51843 470 aaKnown RBP3.84□□□□□ -1.79
SMC4-227ENST00000497984 ATP13A5Q4VNC0 1218 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 PAPPA-AS1Q5QFB9 102 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 C1orf228Q6PIY5 440 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 DSG4Q86SJ6 1040 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 SLC9B2Q86UD5 537 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 CACNA2D3Q8IZS8 1091 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 MASTLQ96GX5 879 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 RBM4Q9BWF3 364 aaKnown RBP3.84□□□□□ -1.79
SMC4-227ENST00000497984 NPLQ9BXD5 320 aaPredicted RBP3.84□□□□□ -1.79
SMC4-227ENST00000497984 KLHL1Q9NR64 748 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 CYSLTR2Q9NS75 346 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 DACT1Q9NYF0 836 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 CD207Q9UJ71 328 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 CNPY2Q9Y2B0 182 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 A0A1W2PS18 150 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 TIPRLO75663 272 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 RFPL2O75678 378 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 KRT38O76015 456 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 RGS11O94810 467 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 SRCP12931 536 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 SRD5A1P18405 259 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 CD53P19397 219 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 RBM5P52756 815 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMC4-227ENST00000497984 PRKAA2P54646 552 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 TMEM30BQ3MIR4 351 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 FAM122CQ6P4D5 195 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 GHDCQ8N2G8 530 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 LINS1Q8NG48 757 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 C1RLQ9NZP8 487 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 PSAT1Q9Y617 370 aa3.83□□□□□ -1.8
SMC4-227ENST00000497984 ADGRF5Q8IZF2 1346 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 ITGAXP20702 1163 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 RYKP34925 604 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 HNF1BP35680 557 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 RELQ04864 619 aaPredicted RBP3.82□□□□□ -1.8
SMC4-227ENST00000497984 SLC20A2Q08357 652 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 OR6Y1Q8NGX8 325 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 CSGALNACT1Q8TDX6 532 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 TAS1R2Q8TE23 839 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 ERGIC1Q969X5 290 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 RNFT2Q96EX2 444 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 LTV1Q96GA3 475 aaPredicted RBP3.82□□□□□ -1.8
SMC4-227ENST00000497984 ENTPD7Q9NQZ7 604 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 ABCF3Q9NUQ8 709 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 IFT80Q9P2H3 777 aaPredicted RBP3.82□□□□□ -1.8
SMC4-227ENST00000497984 CDC14AQ9UNH5 594 aa3.82□□□□□ -1.8
SMC4-227ENST00000497984 ATXN2Q99700 1313 aaKnown RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 IGKV3D-20A0A0C4DH25 116 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 CBY3A6NI87 242 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 F5H423 210 aaPredicted RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 SOCS6O14544 535 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 CST5P28325 142 aaPredicted RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 HNRNPH1P31943 449 aaKnown RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 SLC18A3Q16572 532 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 SOWAHAQ2M3V2 549 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 PPP6R3Q5H9R7 873 aaPredicted RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 NFE4Q86UQ8 179 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 ENAHQ8N8S7 591 aaPredicted RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 KCNH5Q8NCM2 988 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 FAM76AQ8TAV0 307 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 POF1BQ8WVV4 589 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 HSPH1Q92598 858 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 SDCCAG3Q96C92 435 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 CSTL1Q9H114 145 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 TAF1DQ9H5J8 278 aaPredicted RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 TTC12Q9H892 705 aaPredicted RBP3.81□□□□□ -1.8
SMC4-227ENST00000497984 TAAR2Q9P1P5 351 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 TAGLN3Q9UI15 199 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 DAAM1Q9Y4D1 1078 aa3.81□□□□□ -1.8
SMC4-227ENST00000497984 HMX3A6NHT5 357 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 LILRA5A6NI73 299 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 PLRG1O43660 514 aaKnown RBP3.8□□□□□ -1.8
SMC4-227ENST00000497984 ZNF500O60304 480 aaPredicted RBP3.8□□□□□ -1.8
SMC4-227ENST00000497984 ATP2C2O75185 946 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 CDH1P12830 882 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 KRT5P13647 590 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 TNNT1P13805 278 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 HDAC4P56524 1084 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 PMP22Q01453 160 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 CCDC38Q502W7 563 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 ESCO2Q56NI9 601 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 CCNI2Q6ZMN8 369 aaPredicted RBP3.8□□□□□ -1.8
SMC4-227ENST00000497984 CHD1LQ86WJ1 897 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 DNAAF1Q8NEP3 725 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 DMBX1Q8NFW5 382 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 GRAPLQ8TC17 118 aaPredicted RBP3.8□□□□□ -1.8
SMC4-227ENST00000497984 GDPD5Q8WTR4 605 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 GOLGA1Q92805 767 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 SNAPC3Q92966 411 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 ALG14Q96F25 216 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 MPHOSPH6Q99547 160 aaKnown RBP3.8□□□□□ -1.8
SMC4-227ENST00000497984 LITAFQ99732 161 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 SAYSD1Q9NPB0 183 aa3.8□□□□□ -1.8
SMC4-227ENST00000497984 SRP68Q9UHB9 627 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms