RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SNU13P55769 128 aaKnown RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 NME5P56597 212 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 B4GALNT1Q00973 533 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 FGFBP1Q14512 234 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 RNPS1Q15287 305 aaKnown RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 MSMPQ1L6U9 139 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 RBM20Q5T481 1227 aaKnown RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 TMEM88Q6PEY1 159 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 C15orf39Q6ZRI6 1047 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 Q6ZUG5 572 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 FAM109AQ8N4B1 249 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 AFAP1Q8N556 730 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 LINC00482Q8N8I6 264 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 TSPAN14Q8NG11 270 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 GRAPLQ8TC17 118 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 ATG4AQ8WYN0 398 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 LPGAT1Q92604 370 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 TEKT1Q969V4 418 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 TMEM176AQ96HP8 235 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 AJUBAQ96IF1 538 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF830Q96NB3 372 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 ELOVL1Q9BW60 279 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 C1QTNF1Q9BXJ1 281 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 TMEM206Q9H813 350 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 KIF9Q9HAQ2 790 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 EXO1Q9UQ84 846 aaKnown RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 CMAHPQ9Y471 501 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 TROQ12816 1431 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 FRMPD1Q5SYB0 1578 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 SPATA31A3Q5VYP0 1347 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 SLC9B1P1A6NJY1 282 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 AKR1B15C9JRZ8 316 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 CLIC2O15247 247 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 PLRG1O43660 514 aaKnown RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 SLC25A17O43808 307 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 FAM58BPP0C7Q3 252 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 GHRP10912 638 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 IRF1P10914 325 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 PKMP14618 531 aaKnown RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 CTPS1P17812 591 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 ADSSP30520 456 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 CASQ1P31415 396 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 ANXA11P50995 505 aaKnown RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 CXCL9Q07325 125 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 ACSM2AQ08AH3 577 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 DNASE1L3Q13609 305 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 DOC2BQ14184 412 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 USP10Q14694 798 aaKnown RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 ACSM2BQ68CK6 577 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 KCTD9Q7L273 389 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 MIER3Q7Z3K6 550 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 AMER2Q8N7J2 671 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 HJURPQ8NCD3 748 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 FAM216AQ8WUB2 273 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 PARK7Q99497 189 aaKnown RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 PIMREGQ9BSJ6 248 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 DPCDQ9BVM2 203 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 GOLPH3LQ9H4A5 285 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 SAP30LQ9HAJ7 183 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 C17orf75Q9HAS0 396 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 SLC35D1Q9NTN3 355 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 AATFQ9NY61 560 aaKnown RBP eCLIP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 SLC25A13Q9UJS0 675 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.2□□□□□ -1.42
BRCA1-224ENST00000497488 CLCA3PQ9Y6N3 262 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 CCDC18Q5T9S5 1454 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 ARAP3Q8WWN8 1544 aa6.2□□□□□ -1.42
BRCA1-224ENST00000497488 LNP1A1A4G5 178 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 UBXN8O00124 270 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CACNB4O00305 520 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 SLC30A4O14863 429 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CA12O43570 354 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 KLHL41O60662 606 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 USP12O75317 370 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CELF2O95319 508 aaKnown RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 MED26O95402 600 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 TRUB2O95900 331 aaKnown RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 FURINP09958 794 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF28P17035 718 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ADRA2CP18825 462 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ACHEP22303 614 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 MCM5P33992 734 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 PTPN9P43378 593 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 IFNAR2P48551 515 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 BLKP51451 505 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 SP2Q02086 613 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ZMAT1Q5H9K5 638 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CXorf66Q5JRM2 361 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 PRR31Q5SQ13 230 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 C6orf163Q5TEZ5 329 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 SFMBT2Q5VUG0 894 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 MOB3CQ70IA8 216 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 LPCAT2Q7L5N7 544 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 TAOK1Q7L7X3 1001 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 RNF144BQ7Z419 303 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CENPVQ7Z7K6 275 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 GPAT4Q86UL3 456 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 DZIP1Q86YF9 867 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms