RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	MALT1	Q9UDY8	824 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	NFS1	Q9Y697	457 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204		A0A087X0M5	115 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CCDC196	A0A1B0GTZ2	297 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204		A0A1B0GX30	115 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CPED1	A4D0V7	1026 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	KRT38	O76015	456 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	BAIAP3	O94812	1187 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CH25H	O95992	272 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CSF1	P09603	554 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	IFIT1	P09914	478 aa	Known RBP	2.54	□□□□□ -2
RAD50-208	ENST00000496204	CFC1B	P0CG36	223 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CFC1	P0CG37	223 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	IGHV4-30-4	P0DP06	118 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	SSTR2	P30874	369 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	KRT9	P35527	623 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	GJC1	P36383	396 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	PTPN9	P43378	593 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CRIP2	P52943	208 aa	Predicted RBP	2.54	□□□□□ -2
RAD50-208	ENST00000496204	SLC18A2	Q05940	514 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	ST3GAL1	Q11201	340 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	PDCL	Q13371	301 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	LPIN1	Q14693	890 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	ANKRD1	Q15327	319 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	RPS6KA2	Q15349	733 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CTXN3	Q4LDR2	81 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	SLC9C2	Q5TAH2	1124 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	STPG1	Q5TH74	334 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	NCAPH2	Q6IBW4	605 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CFAP161	Q6P656	301 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CCDC129	Q6ZRS4	1044 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	MARK2	Q7KZI7	788 aa	Known RBP	2.54	□□□□□ -2
RAD50-208	ENST00000496204	SYT13	Q7L8C5	426 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	DCUN1D3	Q8IWE4	304 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	ANKRD44	Q8N8A2	993 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	SETD9	Q8NE22	299 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CEP70	Q8NHQ1	597 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	ST8SIA4	Q92187	359 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	GOLGA1	Q92805	767 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	KTI12	Q96EK9	354 aa	Predicted RBP	2.54	□□□□□ -2
RAD50-208	ENST00000496204	RRP36	Q96EU6	259 aa	Known RBP	2.54	□□□□□ -2
RAD50-208	ENST00000496204	GPR63	Q9BZJ6	419 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	PAIP1	Q9H074	479 aa	Known RBP	2.54	□□□□□ -2
RAD50-208	ENST00000496204	PLEKHA2	Q9HB19	425 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	PREB	Q9HCU5	417 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	ATP8A2	Q9NTI2	1148 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	SMC4	Q9NTJ3	1288 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	BLOC1S4	Q9NUP1	217 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	TMLHE	Q9NVH6	421 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	FBXO40	Q9UH90	709 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	BAG5	Q9UL15	447 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	DNAJC16	Q9Y2G8	782 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	CLDN16	Q9Y5I7	305 aa		2.54	□□□□□ -2
RAD50-208	ENST00000496204	NOTCH3	Q9UM47	2321 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	SNED1	Q8TER0	1413 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204		A0A096LPK6	155 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	VWA3A	A6NCI4	1184 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	OR6C68	A6NDL8	312 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	STX16-NPEPL1	H3BU86	382 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	STX16	O14662	325 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	CCNT1	O60563	726 aa	Known RBP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	TSPAN3	O60637	253 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	VNN2	O95498	520 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	PMS2P2	O95744	297 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	AMD1	P17707	334 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	YWHAQ	P27348	245 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	SKIV2L2	P42285	1042 aa	Known RBP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	GPR12	P47775	334 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	CENPA	P49450	140 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	RBM5	P52756	815 aa	Known RBP eCLIP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	CASP6	P55212	293 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	THOC5	Q13769	683 aa	Known RBP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	BAK1	Q16611	211 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	ME3	Q16798	604 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	AP5B1	Q2VPB7	878 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	FBXO43	Q4G163	708 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	ZNF484	Q5JVG2	852 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	WDR45B	Q5MNZ6	344 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	GPATCH4	Q5T3I0	446 aa	Known RBP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	ATG16L1	Q676U5	607 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	SYNE3	Q6ZMZ3	975 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	NEK10	Q6ZWH5	1172 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	TUBA1A	Q71U36	451 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	BRINP3	Q76B58	766 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	EXOC3L1	Q86VI1	746 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	ZNF441	Q8N8Z8	693 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	LMNTD1	Q8N9Z9	388 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	TRIB2	Q92519	343 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	ZBTB10	Q96DT7	871 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	NEUROD6	Q96NK8	337 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	TUBA1C	Q9BQE3	449 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	MMP28	Q9H239	520 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	EVA1A	Q9H8M9	152 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	UBTD1	Q9HAC8	227 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	EBF2	Q9HAK2	575 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	TLR8	Q9NR97	1041 aa	Known RBP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	TBC1D22B	Q9NU19	505 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	NRBP1	Q9UHY1	535 aa		2.53	□□□□□ -2
RAD50-208	ENST00000496204	FBXO2	Q9UK22	296 aa	Predicted RBP	2.53	□□□□□ -2
RAD50-208	ENST00000496204	RRP7A	Q9Y3A4	280 aa	Known RBP	2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms