RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SGF29Q96ES7 293 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 FAR2Q96K12 515 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 B3GALT6Q96L58 329 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 OLFM1Q99784 485 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SEMA3CQ99985 751 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 OSBPL1AQ9BXW6 950 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 UNKQ9C0B0 810 aaKnown RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 RETREG1Q9H6L5 497 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ACSS2Q9NR19 701 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 VWA7Q9Y334 891 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 GREB1Q4ZG55 1949 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ENPP3O14638 875 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 HOXA2O43364 376 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 TLR5O60602 858 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 PRAMEF11O60813 436 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ZMPSTE24O75844 475 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 PDE5AO76074 875 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 EPOP01588 193 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ATXN1LP0C7T5 689 aaKnown RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 HOXB8P17481 243 aaPredicted RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 TACR2P21452 398 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 NUDT2P50583 147 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 MTTPP55157 894 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 PFKPQ01813 784 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SATB1Q01826 763 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 NSUN2Q08J23 767 aaKnown RBP eCLIP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 NOGQ13253 232 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 PDCD2Q16342 344 aaPredicted RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ZNF789Q5FWF6 425 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ANO7Q6IWH7 933 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 FAM45BPQ6NSW5 357 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 IRGCQ6NXR0 463 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ANKS3Q6ZW76 656 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 PGBD5Q8N414 524 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 KDM1BQ8NB78 822 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 KYQ8NBH2 561 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 FAM45AQ8TCE6 357 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 MICAL1Q8TDZ2 1067 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SLC26A7Q8TE54 656 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 HDAC10Q969S8 669 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 CCDC124Q96CT7 223 aaKnown RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 FEM1CQ96JP0 617 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ZNF599Q96NL3 588 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 CASD1Q96PB1 797 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 VCX3BQ9H321 246 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 GTSE1Q9NYZ3 720 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 POMPQ9Y244 141 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ARVCFO00192 962 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 AIM2O14862 343 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 GLP2RO95838 553 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 PDHA1P08559 390 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 ZDHHC11BP0C7U3 371 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 ABL2P42684 1182 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 ERFP50548 548 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 DSG1Q02413 1049 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 GALNT1Q10472 559 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-208ENST00000496116 BFSP2Q13515 415 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 PEX6Q13608 980 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 HERC3Q15034 1050 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 CIR1Q86X95 450 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-208ENST00000496116 SNX32Q86XE0 403 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 CEP70Q8NHQ1 597 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 PXYLP1Q8TE99 480 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 MAELQ96JY0 434 aaKnown RBP11.13□□□□□ -0.63
CMSS1-208ENST00000496116 UBXN10Q96LJ8 280 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 MRPL9Q9BYD2 267 aaKnown RBP11.13□□□□□ -0.63
CMSS1-208ENST00000496116 CCSER2Q9H7U1 834 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 MARCH5Q9NX47 278 aa11.13□□□□□ -0.63
CMSS1-208ENST00000496116 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.13□□□□□ -0.633e-9■■□□□ 12.4
CMSS1-208ENST00000496116 CORO1CQ9ULV4 474 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-208ENST00000496116 TTC24A2A3L6 582 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 A8MT66 165 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 LDB2O43679 373 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 SMNDC1O75940 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 SERPINF2P08697 491 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 CDC25CP30307 473 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 ATP5C1P36542 298 aaKnown RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 ACVRL1P37023 503 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 SLC11A1P49279 550 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 ACVR1Q04771 509 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 DUSP4Q13115 394 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 MRNIPQ6NTE8 343 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 FAM43BQ6ZT52 329 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 DBF4BQ8NFT6 615 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 BLOC1S5Q8TDH9 187 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 PYDC1Q8WXC3 89 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 FAM136AQ96C01 138 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 TMEM175Q9BSA9 504 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 TTPALQ9BTX7 342 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 NACA2Q9H009 215 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 MAGEH1Q9H213 219 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 ZBTB26Q9HCK0 441 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms