RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 LEFTY1O75610 366 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 HLA-DRAP01903 254 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 SRCP12931 536 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 LCP1P13796 627 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 HTR1BP28222 390 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 ALDH4A1P30038 563 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TSPAN7P41732 249 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 STAT5AP42229 794 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 DAOAP59103 153 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 BST2Q10589 180 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 HLTFQ14527 1009 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 ALG11Q2TAA5 492 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 GOLGA7BQ2TAP0 167 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 RABGAP1LQ5R372 815 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 CXorf57Q6NSI4 855 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TRIM46Q7Z4K8 759 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 CIR1Q86X95 450 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 NELFCDQ8IXH7 590 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TSEN2Q8NCE0 465 aaKnown RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 CHST14Q8NCH0 376 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 CCDC150Q8NCX0 1101 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 FAM46DQ8NEK8 389 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 ATL2Q8NHH9 583 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TSACCQ96A04 125 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 ZNF775Q96BV0 537 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 RTP4Q96DX8 246 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 LUZP4Q9P127 313 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 RCOR3Q9P2K3 495 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 HESX1Q9UBX0 185 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 LIMCH1Q9UPQ0 1083 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 HS3ST2Q9Y278 367 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TLR6Q9Y2C9 796 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 UNC13CQ8NB66 2214 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TRPM6Q9BX84 2022 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 CDC14CA4D256 554 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 ANKUB1A6NFN9 424 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 RHPN2P1A8MT19 583 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 DNAJB5O75953 348 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 STK17BO94768 372 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 L1CAMP32004 1257 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 STAT6P42226 847 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 LIMK2P53671 638 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 OR1D5P58170 312 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 RNASE9P60153 205 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 KRT83P78385 493 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 B4GALNT1Q00973 533 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 DHX9Q08211 1270 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 ARHGAP17Q68EM7 881 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 ENPP7Q6UWV6 458 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 CEACAM20Q6UY09 585 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 CCDC73Q6ZRK6 1079 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 TAF8Q7Z7C8 310 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 SCML4Q8N228 414 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 ESX1Q8N693 406 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 CENPTQ96BT3 561 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZPBPQ9BS86 351 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 FEM1AQ9BSK4 669 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 SLC25A23Q9BV35 468 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 MUC3BQ9H195 1237 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 DPEP2Q9H4A9 486 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZFAND3Q9H8U3 227 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 NEUROD4Q9HD90 331 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 MRPL40Q9NQ50 206 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 OCIAD1Q9NX40 245 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 CGNQ9P2M7 1197 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 KLQ9UEF7 1012 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 XPO7Q9UIA9 1087 aaKnown RBP9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 PCDHGA11Q9Y5H2 935 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 RPS6KL1Q9Y6S9 549 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 SVILO95425 2214 aa9.71□□□□□ -0.86
SMARCAL1-213ENST00000496037 TMEM110-MUSTN1A8MSY1 372 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 RNF103O00237 685 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 B4GAT1O43505 415 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 TNFP01375 233 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 LTFP02788 710 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 THRAP10827 490 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 DRD2P14416 443 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 RRM1P23921 792 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 GJB2P29033 226 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 PTGER4P35408 488 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 DLSTP36957 453 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 PEX5P50542 639 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 SRP54P61011 504 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 TESK1Q15569 626 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 JMJD6Q6NYC1 403 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 C22orf39Q6P5X5 142 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 OGFOD3Q6PK18 319 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 PARS2Q7L3T8 475 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 C12orf56Q8IXR9 622 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 OR4D9Q8NGE8 314 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 KIAA1524Q8TCG1 905 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZNF507Q8TCN5 953 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 DQX1Q8TE96 717 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 IRGQQ8WZA9 623 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 RAB7BQ96AH8 199 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 ARHGEF26Q96DR7 871 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms