RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PIAS3Q9Y6X2 628 aa6.87□□□□□ -1.31
VIM-207ENST00000495528 F5P12259 2224 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 VWA8A3KMH1 1905 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 TRGV11A0A075B6L2 103 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 PRAMEF33A0A0G2JMD5 474 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 GOLGA6L4A6NEF3 574 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 HEPACAM2A8MVW5 462 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 H7C4K7 107 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 K7ERI5 159 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 SLC30A4O14863 429 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 ZNF263O14978 683 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 SYN3O14994 580 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 PRAMEF10O60809 474 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 YEATS4O95619 227 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 RETP07949 1114 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 PIM1P11309 404 aaPredicted RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 MYL4P12829 197 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 HOXC13P31276 330 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 CXCL12P48061 93 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 CCR3P51677 355 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 VAV2P52735 878 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 EFNA5P52803 228 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 TWF1Q12792 350 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 SRSF5Q13243 272 aaKnown RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 BOP1Q14137 746 aaKnown RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 SIM2Q14190 667 aaPredicted RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 TEAD2Q15562 447 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 IL17AQ16552 155 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 CTXN3Q4LDR2 81 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 TPGS2Q68CL5 300 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 LAIR1Q6GTX8 287 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 ARMC6Q6NXE6 501 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 LARP4BQ92615 738 aaKnown RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 SMARCD2Q92925 531 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 C18orf25Q96B23 403 aaPredicted RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 RSPRY1Q96DX4 576 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 PTCD3Q96EY7 689 aaKnown RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 IFT74Q96LB3 600 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 CCDC94Q9BW85 323 aaPredicted RBP6.86□□□□□ -1.31
VIM-207ENST00000495528 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 PANK2Q9BZ23 570 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 CDT1Q9H211 546 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 TRPV5Q9NQA5 729 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 SEMA4GQ9NTN9 838 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 CPNE7Q9UBL6 633 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 RAB23Q9ULC3 237 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 PCDHA7Q9UN72 937 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 MIA3Q5JRA6 1907 aa6.86□□□□□ -1.31
VIM-207ENST00000495528 ARID2Q68CP9 1835 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 FRYLO94915 3013 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 VWA3AA6NCI4 1184 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 CCDC169A6NNP5 214 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 PPP6R2O75170 966 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 BMP15O95972 392 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 OR52Z1P0C646 297 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 BRAFP15056 766 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 KCNE1P15382 129 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 PEX2P28328 305 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 RPL9P32969 192 aaKnown RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 GNALP38405 381 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 NPTX2P47972 431 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ANXA11P50995 505 aaKnown RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 SUMO3P55854 103 aaPredicted RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 UCP3P55916 312 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 PEX3P56589 373 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 RPS7P62081 194 aaKnown RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 FAM193AP78312 1265 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 DYRK1AQ13627 763 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ST3GAL2Q16842 350 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ZNF783Q6ZMS7 281 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ZNF627Q7L945 461 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 MFSD6LQ8IWD5 586 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ADGRG5Q8IZF4 528 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ELMOD1Q8N336 334 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 MPP5Q8N3R9 675 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 SPEM1Q8N4L4 309 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 OR6B3Q8NGW1 331 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ERMNQ8TAM6 284 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 POC1BQ8TC44 478 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 DEPDC1BQ8WUY9 529 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 SNX19Q92543 992 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 KIFAP3Q92845 792 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ZBTB45Q96K62 511 aaPredicted RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 SLC46A1Q96NT5 459 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 LRRC3BQ96PB8 259 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 TRIM54Q9BYV2 358 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 TRPV4Q9HBA0 871 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 TMEM74BQ9NUR3 256 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 SLC38A7Q9NVC3 462 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 C2orf42Q9NWW7 574 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 AFF4Q9UHB7 1163 aaKnown RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 FBXO2Q9UK22 296 aaPredicted RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 MED16Q9Y2X0 877 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 PLEKHM1Q9Y4G2 1056 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 SRPRBQ9Y5M8 271 aaKnown RBP6.85□□□□□ -1.31
VIM-207ENST00000495528 RAD54BQ9Y620 910 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 EPG5Q9HCE0 2579 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms