RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
CTNS-207ENST00000495445 UCKL1Q9NWZ5 548 aa17.41■□□□□ 0.38
CTNS-207ENST00000495445 KLF15Q9UIH9 416 aa17.41■□□□□ 0.38
CTNS-207ENST00000495445 ATP8A1Q9Y2Q0 1164 aa17.41■□□□□ 0.38
CTNS-207ENST00000495445 LRRK1Q38SD2 2015 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 TTC24A2A3L6 582 aaPredicted RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 C3orf70A6NLC5 250 aaPredicted RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 ZNF487B1APH4 448 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 TRIM38O00635 465 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 MFSD11O43934 449 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 SDC3O75056 442 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 NME1P15531 152 aaKnown RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 XPAP23025 273 aaPredicted RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 CCNCP24863 283 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 IGFALSP35858 605 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 GARSP41250 739 aaKnown RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 LIG3P49916 1009 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 SLC10A2Q12908 348 aaPredicted RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 RALGDSQ12967 914 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 EIF2B5Q13144 721 aaKnown RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 SMAD1Q15797 465 aaKnown RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 WSCD2Q2TBF2 565 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 PROX2Q3B8N5 592 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 MARC1Q5VT66 337 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 LRRC38Q5VT99 294 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 ERAP2Q6P179 960 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 UNQ6494/PRO21346Q6UXR6 183 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 VSIG1Q86XK7 387 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 CBARPQ8N350 705 aaPredicted RBP17.4■□□□□ 0.38
CTNS-207ENST00000495445 MAML1Q92585 1016 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 RNF157Q96PX1 679 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 C1QTNF7Q9BXJ2 289 aa17.4■□□□□ 0.38
CTNS-207ENST00000495445 ANKRD36A6QL64 1941 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 A0A1W2PQ67 120 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 SCAMP1O15126 338 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 MATN3O15232 486 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 SOCS5O75159 536 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 CDK4P11802 303 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 C6P13671 934 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 MMP13P45452 471 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 ZNF75DP51815 510 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 HADHBP55084 474 aaKnown RBP17.39■□□□□ 0.37
CTNS-207ENST00000495445 HNRNPKP61978 463 aaKnown RBP eCLIP17.39■□□□□ 0.37
CTNS-207ENST00000495445 DNAJC3Q13217 504 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 PDE1CQ14123 709 aaPredicted RBP17.39■□□□□ 0.37
CTNS-207ENST00000495445 ZNF235Q14590 738 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 LRRC14Q15048 493 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 ALG1LQ6GMV1 187 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 LIPIQ6XZB0 460 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 KDM7AQ6ZMT4 941 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 DPPA4Q7L190 304 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 PARGQ86W56 976 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 OR4C6Q8NH72 309 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 MRFAP1L1Q96HT8 127 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 PNMA8BQ9ULN7 279 aaPredicted RBP17.39■□□□□ 0.37
CTNS-207ENST00000495445 COQ6Q9Y2Z9 468 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 PPIL1Q9Y3C6 166 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 PCDHGC4Q9Y5F7 938 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 CSNK1G3Q9Y6M4 447 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 TDRD6O60522 2096 aaKnown RBP17.39■□□□□ 0.37
CTNS-207ENST00000495445 USP24Q9UPU5 2620 aa17.39■□□□□ 0.37
CTNS-207ENST00000495445 GOLGA8CPA6NN73 597 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 SIGLEC6O43699 453 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 PRKCGP05129 697 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 CKMT2P17540 419 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 GM2AP17900 193 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 GJC1P36383 396 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 SLC1A1P43005 524 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 ACADVLP49748 655 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 PEX5P50542 639 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 PTK2BQ14289 1009 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 IHHQ14623 411 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 IFI16Q16666 785 aaKnown RBP17.38■□□□□ 0.37
CTNS-207ENST00000495445 ZNF542PQ5EBM4 170 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 CFAP58Q5T655 872 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 GAS2L3Q86XJ1 694 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 CCDC170Q8IYT3 715 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 BBS5Q8N3I7 341 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 NSMCE1Q8WV22 266 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 SCUBE2Q9NQ36 999 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 DNAJC28Q9NX36 388 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 AMACRQ9UHK6 382 aa17.38■□□□□ 0.37
CTNS-207ENST00000495445 TMEM8BA6NDV4 472 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 TMEM110-MUSTN1A8MSY1 372 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 FECHP22830 423 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 CES1P23141 567 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 ACP1P24666 158 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 MAGEA1P43355 309 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 MAXP61244 160 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 SEMG2Q02383 582 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 GBE1Q04446 702 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 ILKQ13418 452 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 IRF4Q15306 451 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 SLC9A4Q6AI14 798 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 GALNT15Q8N3T1 639 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 PLD5Q8N7P1 536 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 FAM181AQ8N9Y4 354 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 TBATAQ96M53 351 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 NLGN3Q9NZ94 848 aa17.37■□□□□ 0.37
CTNS-207ENST00000495445 DTLQ9NZJ0 730 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms