RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 SCINQ9Y6U3 715 aa2.87□□□□□ -1.95
LRIF1-203ENST00000494675 UTYO14607 1347 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 RPS10-NUDT3A0A1W2PQS6 291 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 FSD2A1L4K1 749 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 KDM4EB2RXH2 506 aaPredicted RBP2.86□□□□□ -1.95
LRIF1-203ENST00000494675 NPIPB11E5RHQ5 1161 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 MS4A18H0YCH9 400 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 H3BNX3 289 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 KCNAB3O43448 404 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 RGS11O94810 467 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 SCGB1D1O95968 90 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 ACADMP11310 421 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 ETFAP13804 333 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 ARSBP15848 533 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 MYF6P23409 242 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 PBX3P40426 434 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 P2RX3P56373 397 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 ZP1P60852 638 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 LAMB3Q13751 1172 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 FRG1Q14331 258 aaKnown RBP2.86□□□□□ -1.95
LRIF1-203ENST00000494675 SOWAHAQ2M3V2 549 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 TCTN1Q2MV58 587 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 DCAF6Q58WW2 860 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 SNX30Q5VWJ9 437 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 ITPRIPL1Q6GPH6 555 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 MZT2BQ6NZ67 158 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 TMED8Q6PL24 325 aaPredicted RBP2.86□□□□□ -1.95
LRIF1-203ENST00000494675 NEK10Q6ZWH5 1172 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 IKBIPQ70UQ0 350 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 MB21D2Q8IYB1 491 aaPredicted RBP2.86□□□□□ -1.95
LRIF1-203ENST00000494675 FRMD1Q8N878 549 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 MIGA1Q8NAN2 632 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 TMEM116Q8NCL8 245 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 TMEM163Q8TC26 289 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 GPT2Q8TD30 523 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 FAM149B1Q96BN6 582 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 PABPC5Q96DU9 382 aaKnown RBP2.86□□□□□ -1.95
LRIF1-203ENST00000494675 APOLD1Q96LR9 279 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 BARD1Q99728 777 aaKnown RBP2.86□□□□□ -1.95
LRIF1-203ENST00000494675 SLC6A13Q9NSD5 602 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 ZBTB40Q9NUA8 1239 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 SQORQ9Y6N5 450 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 CAPN7Q9Y6W3 813 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 A3GALT2U3KPV4 340 aa2.86□□□□□ -1.95
LRIF1-203ENST00000494675 A0A0U1RQF3 1178 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 FAM237BA0A1B0GVD1 139 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 ANKRD18BA2A2Z9 1011 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 I6L893 689 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 IFNL4K9M1U5 179 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 AP3D1O14617 1153 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 LDB2O43679 373 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 ITM2AO43736 263 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 LIASO43766 372 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 FGF2P09038 288 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 LAMP2P13473 410 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 KRT10P13645 584 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 TNFRSF1BP20333 461 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 ITGAXP20702 1163 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 CDAP32320 146 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 PPARGP37231 505 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 THPOP40225 353 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 NR4A2P43354 598 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 CLNS1AP54105 237 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 FGFBP1Q14512 234 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 COL28A1Q2UY09 1125 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 OTUD1Q5VV17 481 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 LCTLQ6UWM7 567 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 MON1BQ7L1V2 547 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 ZNF367Q7RTV3 350 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 NOXA1Q86UR1 476 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 PSPC1Q8WXF1 523 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 USP6NLQ92738 828 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 FBXL8Q96CD0 374 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 PERPQ96FX8 193 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 MAP7D2Q96T17 732 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 RBM38Q9H0Z9 239 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 PLEKHA4Q9H4M7 779 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 KIF9Q9HAQ2 790 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 MAGEE1Q9HCI5 957 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 FBRSL1Q9HCM7 1045 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 CYSLTR2Q9NS75 346 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 SEPT11Q9NVA2 429 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 FBXO2Q9UK22 296 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 CORO1CQ9ULV4 474 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 TTC3P53804 2025 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 BECN2A8MW95 431 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 TAF4O00268 1085 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 VWA5AO00534 786 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 EIF2S1P05198 315 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 HOXB5P09067 269 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 SNHG28P0DPA3 235 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 MLH1P40692 756 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 KCNJ4P48050 445 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 PIP4K2AP48426 406 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 SORDQ00796 357 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 DRAP1Q14919 205 aaPredicted RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 TWIST1Q15672 202 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 ODF3L2Q3SX64 289 aa2.85□□□□□ -1.95
LRIF1-203ENST00000494675 DNTTIP2Q5QJE6 756 aaKnown RBP2.85□□□□□ -1.95
LRIF1-203ENST00000494675 TTI2Q6NXR4 508 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms