RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.2□□□□□ -0.62
APTX-230ENST00000494649 HACD1B0YJ81 288 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SLC7A4O43246 635 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 PGLSO95336 258 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 IFNB1P01574 187 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 ETS1P14921 441 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 MAPK8P45983 427 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 KCNJ1P48048 391 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 CSNK1EP49674 416 aaKnown RBP11.2□□□□□ -0.62
APTX-230ENST00000494649 EPHB1P54762 984 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 CLDN2P57739 230 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 IRX4P78413 519 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 XRCC4Q13426 336 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 GRM3Q14832 879 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SIX1Q15475 284 aaPredicted RBP11.2□□□□□ -0.62
APTX-230ENST00000494649 WDR45BQ5MNZ6 344 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 BRAT1Q6PJG6 821 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 TSPAN33Q86UF1 283 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SYT12Q8IV01 421 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 TTC13Q8NBP0 860 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 FATE1Q969F0 183 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 ECHDC3Q96DC8 303 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SERAC1Q96JX3 654 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 TDRD1Q9BXT4 1180 aaKnown RBP11.2□□□□□ -0.62
APTX-230ENST00000494649 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 USP29Q9HBJ7 922 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SEMA4GQ9NTN9 838 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 PTPRZ1P23471 2315 aaPredicted RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 NPIPB15A6NHN6 443 aaPredicted RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 AREL1O15033 823 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 RAD51BO15315 384 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 HTRA2O43464 458 aaPredicted RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 LIASO43766 372 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 GDF9O60383 454 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 PSMB4P28070 264 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 CCDC15Q0P6D6 951 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ZNF284Q2VY69 593 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ANKRD20A2Q5SQ80 823 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 PRAMEF14Q5SWL7 426 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ANKRD20A1Q5TYW2 823 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ANKRD20A3Q5VUR7 823 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ERAP2Q6P179 960 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 HORMAD1Q86X24 394 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 GLIS1Q8NBF1 620 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 IPMKQ8NFU5 416 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 SLC35B2Q8TB61 432 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 CXorf40AQ8TE69 158 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 RMDN1Q96DB5 314 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 IMP4Q96G21 291 aaKnown RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 OXNAD1Q96HP4 312 aaPredicted RBP11.19□□□□□ -0.62
APTX-230ENST00000494649 APOL2Q9BQE5 337 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ORAI3Q9BRQ5 295 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 PCDH9Q9HC56 1237 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 PREBQ9HCU5 417 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 DKK3Q9UBP4 350 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 B4GALT6Q9UBX8 382 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 ZNF148Q9UQR1 794 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 PLXNA2O75051 1894 aa11.19□□□□□ -0.62
APTX-230ENST00000494649 RALGAPA1Q6GYQ0 2036 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 A0A1W2PPC4 97 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 BCAT2O15382 392 aaPredicted RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 SOCS5O75159 536 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 PRLP01236 227 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 ZSCAN5DPP0CG00 497 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 MSNP26038 577 aaKnown RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 CHRNA4P43681 627 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 LIG3P49916 1009 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 SPARCL1Q14515 664 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 ALG1LQ6GMV1 187 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 SLC25A41Q8N5S1 370 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 PIH1D2Q8WWB5 315 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 FEM1CQ96JP0 617 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 C16orf45Q96MC5 204 aaPredicted RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 GORASP1Q9BQQ3 440 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 GTPBP2Q9BX10 602 aaKnown RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 SLC25A51Q9H1U9 297 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 TM9SF3Q9HD45 589 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 HAUS2Q9NVX0 235 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 PIEZO1Q92508 2521 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 TNRC6BQ9UPQ9 1833 aaKnown RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 A0A1B0GVT2 93 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 TSPAN11A1L157 253 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 MTSS1O43312 755 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 FZD6O60353 706 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 USP12O75317 370 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 C6P13671 934 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 LHCGRP22888 699 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 CD27P26842 260 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 HNF1BP35680 557 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 MMP12P39900 470 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 RPS21P63220 83 aaKnown RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 RALGDSQ12967 914 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 SPDYCQ5MJ68 293 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 SYT10Q6XYQ8 523 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 DNASE2BQ8WZ79 361 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 RAB7BQ96AH8 199 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms