RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PLEKHD1A6NEE1 506 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 SMTNL1A8MU46 457 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 ATP2C2O75185 946 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 MT-CYBP00156 380 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 F9P00740 461 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 IRF1P10914 325 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 COX7A2P14406 83 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 DDX5P17844 614 aaKnown RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 CNTFP26441 200 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 HNRNPH1P31943 449 aaKnown RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 MAPK9P45984 424 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 PDLIM4P50479 330 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 CLCN5P51795 746 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 FOXD4Q12950 439 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 GORABQ5T7V8 394 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 TYW3Q6IPR3 259 aaKnown RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 PLEKHA7Q6IQ23 1121 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 H1FNTQ75WM6 255 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 LINGO2Q7L985 606 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 ARMC9Q7Z3E5 817 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 KIAA2013Q8IYS2 634 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 DCP1BQ8IZD4 617 aaKnown RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 TSPYL6Q8N831 410 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 SCCPDHQ8NBX0 429 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 SMRP1Q8NCR6 262 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 BEST2Q8NFU1 509 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 NFKBIDQ8NI38 313 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 ZC3HAV1LQ96H79 300 aaKnown RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 TTYH1Q9H313 450 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 PLEKHA4Q9H4M7 779 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 DDX4Q9NQI0 724 aaKnown RBP4.38□□□□□ -1.71
ITGB1-216ENST00000493758 KCND2Q9NZV8 630 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 PCDHGB1Q9Y5G3 927 aa4.38□□□□□ -1.71
ITGB1-216ENST00000493758 TNPO2O14787 897 aaKnown RBP4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TSPAN4O14817 238 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 LDLRAD4O15165 306 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 HSPA12AO43301 675 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TNFSF14O43557 240 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TACC1O75410 805 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 MTA2O94776 668 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TFP02787 698 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 MMP2P08253 660 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 HDAC4P56524 1084 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 UFM1P61960 85 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 RPP30P78346 268 aaKnown RBP4.37□□□□□ -1.71
ITGB1-216ENST00000493758 EFNB3Q15768 340 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TCTN1Q2MV58 587 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 KIF19Q2TAC6 998 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 FAM122CQ6P4D5 195 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 PRSS57Q6UWY2 283 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 MTSS1LQ765P7 747 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 GPAT4Q86UL3 456 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 LURAP1LQ8IV03 231 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 EXOC8Q8IYI6 725 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 AGBL3Q8NEM8 1001 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TMED6Q8WW62 240 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 APOPT1Q96IL0 206 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 ZNF385AQ96PM9 386 aaKnown RBP4.37□□□□□ -1.71
ITGB1-216ENST00000493758 DUX5Q96PT3 197 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 SLITRK1Q96PX8 696 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 LBHD1Q9BQE6 289 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-216ENST00000493758 H2AFJQ9BTM1 129 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 AGXT2Q9BYV1 514 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 ESRP2Q9H6T0 727 aaKnown RBP4.37□□□□□ -1.71
ITGB1-216ENST00000493758 SLCO3A1Q9UIG8 710 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 KCNG2Q9UJ96 466 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 TMEM98Q9Y2Y6 226 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 NFS1Q9Y697 457 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 CYP46A1Q9Y6A2 500 aa4.37□□□□□ -1.71
ITGB1-216ENST00000493758 NPIPB11E5RHQ5 1161 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 RGS11O94810 467 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 ETFAP13804 333 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 EDN2P20800 178 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 ABCD1P33897 745 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 COMPP49747 757 aaPredicted RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 RRP1P56182 461 aaKnown RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 SNTA1Q13424 505 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 DHX34Q14147 1143 aaKnown RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 ARHGEF6Q15052 776 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 OASLQ15646 514 aaKnown RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 CALCRLQ16602 461 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 SGO1Q5FBB7 561 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 XKR9Q5GH70 373 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 SLC22A25Q6T423 547 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 ESX1Q8N693 406 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 LILRB1Q8NHL6 650 aaPredicted RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 ERGIC1Q969X5 290 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 KLHL29Q96CT2 875 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 NR1H4Q96RI1 486 aaPredicted RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 SPRY4Q9C004 299 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 MKKSQ9NPJ1 570 aaPredicted RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 CISD1Q9NZ45 108 aaKnown RBP4.36□□□□□ -1.71
ITGB1-216ENST00000493758 SARDHQ9UL12 918 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 GTF2A1LQ9UNN4 478 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 STON1Q9Y6Q2 735 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 SCINQ9Y6U3 715 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 KDM3AQ9Y4C1 1321 aa4.36□□□□□ -1.71
ITGB1-216ENST00000493758 TRIP12Q14669 1992 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms