RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 KLHL38Q2WGJ6 581 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 CARD16Q5EG05 197 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 SPANXN3Q5MJ09 141 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 NUDT18Q6ZVK8 323 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 Q6ZVU0 165 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 YTHDF3Q7Z739 585 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ADHFE1Q8IWW8 467 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PLPP6Q8IY26 295 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 EPS8L3Q8TE67 593 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PDCD6IPQ8WUM4 868 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 NXPE3Q969Y0 559 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 RMDN1Q96DB5 314 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 CYTH2Q99418 400 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 KIFC1Q9BW19 673 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ATP13A3Q9H7F0 1226 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PPCSQ9HAB8 311 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 CHRAC1Q9NRG0 131 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 HECAQ9UBI9 543 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TLDC2A0PJX2 215 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 HEATR9A2RTY3 570 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 SOCS5O75159 536 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 KIAA0754O94854 1291 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 KAT7O95251 611 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 PRLP01236 227 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 PDHA1P08559 390 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 CCNHP51946 323 aaPredicted RBP14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 RAD51Q06609 339 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 GRM3Q14832 879 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 MYLK3Q32MK0 819 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 TJAP1Q5JTD0 557 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 NAIF1Q69YI7 327 aaPredicted RBP14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 PKN3Q6P5Z2 889 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 CYS1Q717R9 158 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 CAMK1DQ8IU85 385 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 UCMAQ8WVF2 138 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 ZNF669Q96BR6 464 aaPredicted RBP14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 CHFRQ96EP1 664 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 PGM2Q96G03 612 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 MYO19Q96H55 970 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 TUBGCP5Q96RT8 1024 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 RANBP9Q96S59 729 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 MRM3Q9HC36 420 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 CD320Q9NPF0 282 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 PPANQ9NQ55 473 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 TCAF1Q9Y4C2 921 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 MYO10Q9HD67 2058 aa14.18□□□□□ -0.14
PDZRN3-210ENST00000492909 MUC22E2RYF6 1773 aaPredicted RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 SMIM23A6NLE4 172 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 TTC34A8MYJ7 566 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 ALDH1A2O94788 518 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 POP4O95707 220 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 SERPINA4P29622 427 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 GRIA2P42262 883 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 SLCO1A2P46721 670 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 SEPT6Q14141 434 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 KBTBD12Q3ZCT8 623 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 ANKRD20A4Q4UJ75 823 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 ARMC12Q5T9G4 340 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 CES3Q6UWW8 571 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 DPY19L3Q6ZPD9 716 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PACS2Q86VP3 889 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 KDM1BQ8NB78 822 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 LPCAT1Q8NF37 534 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 OR2A12Q8NGT7 310 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 FRS2Q8WU20 508 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 CENPTQ96BT3 561 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 MFSD3Q96ES6 412 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 CPEB1Q9BZB8 566 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 KCNK12Q9HB15 430 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PRKAG3Q9UGI9 489 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 FETUBQ9UGM5 382 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 LIMD1Q9UGP4 676 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PCDHB9Q9Y5E1 797 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 ANKRD66B4E2M5 251 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 LOC730098B7Z3J9 87 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 POC1B-GALNT4F8VUJ3 575 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 TRAFD1O14545 582 aaPredicted RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 HTRA2O43464 458 aaPredicted RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 FZD6O60353 706 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 CDH16O75309 829 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PGLSO95336 258 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PIGNO95427 931 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 APODP05090 189 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 PRKCHP24723 683 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 NMBRP28336 390 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 GKP32189 559 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 LIG3P49916 1009 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 EPHB1P54762 984 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 RPL26P61254 145 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 LAMB3Q13751 1172 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 FNDC3BQ53EP0 1204 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 TRMT10BQ6PF06 316 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 SLC44A3Q8N4M1 653 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 OTUD6BQ8N6M0 293 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 BLOC1S5Q8TDH9 187 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 ZDHHC6Q9H6R6 413 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 TRPV5Q9NQA5 729 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms