RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CDC25AP30304 524 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 KCNJ4P48050 445 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 SELENOVP59797 346 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 CEBPZQ03701 1054 aaKnown RBP4.11□□□□□ -1.75
CLK1-213ENST00000492793 FGFBP1Q14512 234 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 DRAP1Q14919 205 aaPredicted RBP4.11□□□□□ -1.75
CLK1-213ENST00000492793 DUSP6Q16828 381 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 SOWAHAQ2M3V2 549 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 DCAF6Q58WW2 860 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 ZKSCAN2Q63HK3 967 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 FBXO46Q6PJ61 603 aaPredicted RBP4.11□□□□□ -1.75
CLK1-213ENST00000492793 CYP20A1Q6UW02 462 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 ZNF367Q7RTV3 350 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 PIP4P1Q86T03 277 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 CCDC13Q8IYE1 715 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 TMEM116Q8NCL8 245 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 GPT2Q8TD30 523 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 POMGNT1Q8WZA1 660 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 USP6NLQ92738 828 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 ARHGEF2Q92974 986 aaKnown RBP4.11□□□□□ -1.75
CLK1-213ENST00000492793 FBXL8Q96CD0 374 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 PERPQ96FX8 193 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 ZNF778Q96MU6 729 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 WDFY2Q96P53 400 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 ITPAQ9BY32 194 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 GLIS2Q9BZE0 524 aaPredicted RBP4.11□□□□□ -1.75
CLK1-213ENST00000492793 RBM38Q9H0Z9 239 aaKnown RBP4.11□□□□□ -1.75
CLK1-213ENST00000492793 SH2D4AQ9H788 454 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 KAT14Q9H8E8 782 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 CYSLTR2Q9NS75 346 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
CLK1-213ENST00000492793 PRSS47A8MTI9 375 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 BECN2A8MW95 431 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 B4DGG1 531 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 PTGES3LE9PB15 166 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 GTPBP1O00178 669 aaKnown RBP4.1□□□□□ -1.75
CLK1-213ENST00000492793 DOK2O60496 412 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 GFPT2O94808 682 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 NKX2-2O95096 273 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 EIF2S1P05198 315 aaKnown RBP4.1□□□□□ -1.75
CLK1-213ENST00000492793 CDK4P11802 303 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 RARGP13631 454 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 MAPK4P31152 587 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 CDAP32320 146 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 DCTDP32321 178 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 THPOP40225 353 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 MLH1P40692 756 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 PIP4K2AP48426 406 aaPredicted RBP4.1□□□□□ -1.75
CLK1-213ENST00000492793 CXCR3P49682 368 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 PMS2P54278 862 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 DRG2P55039 364 aaKnown RBP4.1□□□□□ -1.75
CLK1-213ENST00000492793 F2RL1P55085 397 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 FAM27E3Q08E93 113 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 MYBPC2Q14324 1141 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 NEDD9Q14511 834 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 ODF3L2Q3SX64 289 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 FSCBQ5H9T9 825 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 CCDC129Q6ZRS4 1044 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 NEK10Q6ZWH5 1172 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 TTC39CQ8N584 583 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 ZBTB2Q8N680 514 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 SCFD2Q8WU76 684 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 PSPC1Q8WXF1 523 aaKnown RBP4.1□□□□□ -1.75
CLK1-213ENST00000492793 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
CLK1-213ENST00000492793 HMCESQ96FZ2 354 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 VCPIP1Q96JH7 1222 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 TMEM79Q9BSE2 394 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 FAM234AQ9H0X4 552 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 SMARCAD1Q9H4L7 1026 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 POLR1BQ9H9Y6 1135 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 ASAH2Q9NR71 780 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 ZBTB40Q9NUA8 1239 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 TMEM51Q9NW97 253 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 HCFC1R1Q9NWW0 138 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 PLK2Q9NYY3 685 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 DLGAP2Q9P1A6 1054 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 LYVE1Q9Y5Y7 322 aa4.1□□□□□ -1.75
CLK1-213ENST00000492793 A0A0U1RQF3 1178 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 MYO1GB0I1T2 1018 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 AKR1B15C9JRZ8 316 aaPredicted RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 I6L893 689 aaPredicted RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 TNFRSF13BO14836 293 aaPredicted RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 LDB2O43679 373 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 MOSPD3O75425 235 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 IPO7O95373 1038 aaKnown RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 CLTBP09497 229 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 LAMP2P13473 410 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 MYF6P23409 242 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 PIGAP37287 484 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ZP1P60852 638 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 NAE1Q13564 534 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ALG11Q2TAA5 492 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ZNF284Q2VY69 593 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ZSCAN23Q3MJ62 389 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 COLEC12Q5KU26 742 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 DNTTIP2Q5QJE6 756 aaKnown RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 FNBP1LQ5T0N5 605 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 FAM205BPQ63HN1 556 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 TYW3Q6IPR3 259 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms