RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CST6Q15828 149 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 CRY1Q16526 586 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
SNX12-205ENST00000490561 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 SYCP2LQ5T4T6 812 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 EMBQ6PCB8 327 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 USP45Q70EL2 814 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 ZNF534Q76KX8 674 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 NLRP9Q7RTR0 991 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 CAND1Q86VP6 1230 aaKnown RBP13.33□□□□□ -0.28
SNX12-205ENST00000490561 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 SLC25A41Q8N5S1 370 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 OR52K1Q8NGK4 314 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 RAB7BQ96AH8 199 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 NSMCE3Q96MG7 304 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 RANBP9Q96S59 729 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 ZDHHC4Q9NPG8 344 aa13.33□□□□□ -0.28
SNX12-205ENST00000490561 ARGLU1Q9NWB6 273 aaPredicted RBP13.33□□□□□ -0.28
SNX12-205ENST00000490561 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 UPK3BL1B0FP48 263 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 UPK3BL2E5RIL1 263 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 USP12O75317 370 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 CRTAMO95727 393 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 TRBC1P01850 177 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 NEK3P51956 506 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 COPAP53621 1224 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 RPS14P62263 151 aaKnown RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 FZD5Q13467 585 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 GALNT3Q14435 633 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 QPCTQ16769 361 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 PCID2Q5JVF3 399 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 DENND5AQ6IQ26 1287 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 KDELC2Q7Z4H8 507 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 RELL1Q8IUW5 271 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 MMAAQ8IVH4 418 aaKnown RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 PPHLN1Q8NEY8 458 aaKnown RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 PIH1D2Q8WWB5 315 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 PEX13Q92968 403 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 LYSMD1Q96S90 227 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 C19orf43Q9BQ61 176 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 APOL2Q9BQE5 337 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 MRM3Q9HC36 420 aaKnown RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 MAGEE1Q9HCI5 957 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 CD248Q9HCU0 757 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 SAMD15Q9P1V8 674 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
SNX12-205ENST00000490561 F5P12259 2224 aa13.32□□□□□ -0.28
SNX12-205ENST00000490561 CKAP5Q14008 2032 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 TCRBV21S2A2A0A5A6 115 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 HEATR9A2RTY3 570 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 CAPN8A6NHC0 703 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 SLC7A4O43246 635 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 TTC4O95801 387 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 PDHA1P08559 390 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 ACADMP11310 421 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 TSHRP16473 764 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 ADRA1DP25100 572 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 SLC8A1P32418 973 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 GRIA1P42261 906 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 SESN2P58004 480 aaPredicted RBP13.31□□□□□ -0.28
SNX12-205ENST00000490561 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
SNX12-205ENST00000490561 UGP2Q16851 508 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 CCDC38Q502W7 563 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 FNBP1LQ5T0N5 605 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 FBXL19Q6PCT2 694 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 Q6ZS52 159 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 USP30Q70CQ3 517 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 ERN2Q76MJ5 926 aaKnown RBP13.31□□□□□ -0.28
SNX12-205ENST00000490561 KBTBD6Q86V97 674 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 TMPRSS6Q8IU80 811 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 RAVER1Q8IY67 606 aaKnown RBP13.31□□□□□ -0.28
SNX12-205ENST00000490561 FLCNQ8NFG4 579 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 TSTD1Q8NFU3 115 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 BRSK1Q8TDC3 778 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 SIPA1Q96FS4 1042 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 SCRN2Q96FV2 425 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 NEUROG2Q9H2A3 272 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 PABPC3Q9H361 631 aaKnown RBP13.31□□□□□ -0.28
SNX12-205ENST00000490561 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 SARDHQ9UL12 918 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 RIMKLBQ9ULI2 386 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 NCKAP1Q9Y2A7 1128 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 PRUNE2Q8WUY3 3088 aa13.31□□□□□ -0.28
SNX12-205ENST00000490561 MYO18AQ92614 2054 aaKnown RBP13.31□□□□□ -0.28
SNX12-205ENST00000490561 UQCRHLA0A096LP55 91 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 ANTXRLA6NF34 631 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TMEM221A6NGB7 291 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 C2orf81A6NN90 581 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms