RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TRAF1Q13077 416 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 EIF4A2Q14240 407 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 DNTTIP2Q5QJE6 756 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 SNX30Q5VWJ9 437 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 GSTA5Q7RTV2 222 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 NOXA1Q86UR1 476 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 NEK9Q8TD19 979 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 PSPC1Q8WXF1 523 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 GTF3C6Q969F1 213 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 FBXL8Q96CD0 374 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 PABPC5Q96DU9 382 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 PERPQ96FX8 193 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 MAP7D2Q96T17 732 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 CHCHD6Q9BRQ6 235 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 STRA6Q9BX79 667 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 RBM38Q9H0Z9 239 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 MAGEE1Q9HCI5 957 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 ASAH2Q9NR71 780 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 CYSLTR2Q9NS75 346 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 SLC6A13Q9NSD5 602 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 IL36RNQ9UBH0 155 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 LAS1LQ9Y4W2 734 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 KCNE2Q9Y6J6 123 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 RGS14O43566 566 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 SPRY3O43610 288 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 ITM2AO43736 263 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 PAGE4O60829 102 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 ZBED4O75132 1171 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 RNASEH2AO75792 299 aaKnown RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 TOMM40O96008 361 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 CRYABP02511 175 aaKnown RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 ITGAXP20702 1163 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 NFKBIAP25963 317 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 CHATP28329 748 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 SHMT1P34896 483 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 RFX5P48382 616 aaPredicted RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 PMS2P54278 862 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 ARF3P61204 181 aaPredicted RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 ARF1P84077 181 aaKnown RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 GOLGA8DPQ0D2H9 430 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 MAMLD1Q13495 774 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 MYBPC2Q14324 1141 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 FGFBP1Q14512 234 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 ALG11Q2TAA5 492 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 DPCR1Q3MIW9 517 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 FSCBQ5H9T9 825 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 FNBP1LQ5T0N5 605 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 TSSK4Q6SA08 328 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 KLHL24Q6TFL4 600 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 LCTLQ6UWM7 567 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 NEK10Q6ZWH5 1172 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 TECPR1Q7Z6L1 1165 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 CCDC105Q8IYK2 499 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 FRMD1Q8N878 549 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 MIGA1Q8NAN2 632 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 TMEM116Q8NCL8 245 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 MUC13Q9H3R2 512 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 PLEKHA5Q9HAU0 1116 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 CLK4Q9HAZ1 481 aaKnown RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 SCPEP1Q9HB40 452 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 TBC1D22BQ9NU19 505 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 TMEM51Q9NW97 253 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 FZD10Q9ULW2 581 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 AAR2Q9Y312 384 aaKnown RBP4.06□□□□□ -1.76
CD46-216ENST00000490278 NFE2L3Q9Y4A8 694 aa4.06□□□□□ -1.76
CD46-216ENST00000490278 A0A1W2PRG0 241 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 HMGB1P1B2RPK0 211 aaPredicted RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 INO80B-WBP1J3KQ70 363 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 ASAP2O43150 1006 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 SOX30O94993 753 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 NDUFB4O95168 129 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 MMP2P08253 660 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 ACADMP11310 421 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 NAGAP17050 411 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 SCP2P22307 547 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 PBX3P40426 434 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 KCNJ4P48050 445 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 PIP4K2AP48426 406 aaPredicted RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 PGGT1BP53609 377 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 NAP1L1P55209 391 aaKnown RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 GPS2Q13227 327 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 FRG1Q14331 258 aaKnown RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 MED22Q15528 200 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 SGO1Q5FBB7 561 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 WDR78Q5VTH9 848 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 DAB2IPQ5VWQ8 1189 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 MZT2BQ6NZ67 158 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 SLC35F3Q8IY50 421 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 PDILTQ8N807 584 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 BEST2Q8NFU1 509 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 TRIB2Q92519 343 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 TIGD1Q96MW7 591 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 ZNF570Q96NI8 536 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 SLITRK1Q96PX8 696 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 TREX2Q9BQ50 279 aaPredicted RBP4.05□□□□□ -1.76
CD46-216ENST00000490278 ITPAQ9BY32 194 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 TKTL2Q9H0I9 626 aa4.05□□□□□ -1.76
CD46-216ENST00000490278 KIF9Q9HAQ2 790 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms