RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 C1orf54Q8WWF1 131 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 ARRDC3Q96B67 414 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 CAMK1GQ96NX5 476 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 ELF4Q99607 663 aaPredicted RBP10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 CDC6Q99741 560 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 CARD6Q9BX69 1037 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 SLC39A8Q9C0K1 460 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 HECAQ9UBI9 543 aaPredicted RBP10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 WASF3Q9UPY6 502 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 A0A1B0GTQ1 180 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 TLR4O00206 839 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 KRIT1O00522 736 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 RRP9O43818 475 aaKnown RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 PEX11BO96011 259 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 WNT1P04628 370 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ZFXP17010 805 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 MAT2AP31153 395 aaKnown RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 CETN2P41208 172 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 GRK6P43250 576 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ARRB1P49407 418 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 GALNT2Q10471 571 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 STAT4Q14765 748 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 CCNG2Q16589 344 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 KCTD19Q17RG1 926 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 INO80DQ53TQ3 878 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ODF2Q5BJF6 829 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 FBXL19Q6PCT2 694 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 DRICH1Q6PGQ1 229 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ARHGAP36Q6ZRI8 547 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 B4GALNT4Q76KP1 1039 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 HORMAD1Q86X24 394 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 RYBPQ8N488 228 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 OXR1Q8N573 874 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 NOA1Q8NC60 698 aaKnown RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 BAHD1Q8TBE0 780 aaPredicted RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 CELF6Q96J87 481 aaKnown RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 TM6SF2Q9BZW4 377 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ZDHHC6Q9H6R6 413 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 C10orf88Q9H8K7 445 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ERVMER34-1Q9H9K5 563 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 DNPEPQ9ULA0 475 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 HEY1Q9Y5J3 304 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ACTL7AQ9Y615 435 aa10.68□□□□□ -0.7
SCAMP4-208ENST00000489554 ACACBO00763 2458 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 TPRP12270 2363 aaKnown RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 A0A1W2PQU0 124 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 RASA4BC9J798 803 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 WNT9AO14904 365 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 DAPK3O43293 454 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 RASA4O43374 803 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 ATP8B1O43520 1251 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 AP1G1O43747 822 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 PHF2O75151 1096 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 ERLIN1O75477 346 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 TMCC1O94876 653 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 PCDH8O95206 1070 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 POP4O95707 220 aaKnown RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 FTH1P19P0C7X4 201 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 ADRB3P13945 408 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 AKT2P31751 481 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 COILP38432 576 aaPredicted RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 PTGIRP43119 386 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 KCNJ1P48048 391 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 NR2C2P49116 596 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 NDST2P52849 883 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 NXPH1P58417 271 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 RAD51Q06609 339 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 SERINC3Q13530 473 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 PRKD1Q15139 912 aaPredicted RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 MYLK3Q32MK0 819 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 ZNF805Q5CZA5 627 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 FAM182AQ5T1J6 154 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 CCDC181Q5TID7 509 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 KIAA1161Q6NSJ0 714 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 LZTR1Q8N653 840 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 MAIP1Q8WWC4 291 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 ADAMTS14Q8WXS8 1223 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 P3H4Q92791 437 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 RAB7BQ96AH8 199 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 HMCESQ96FZ2 354 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 GDAP1L1Q96MZ0 367 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 NAP1L3Q99457 506 aaPredicted RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 SCNM1Q9BWG6 230 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 MAK16Q9BXY0 300 aaKnown RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 DDX47Q9H0S4 455 aaKnown RBP10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 USP29Q9HBJ7 922 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 NEU2Q9Y3R4 380 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 NEUROG3Q9Y4Z2 214 aa10.67□□□□□ -0.7
SCAMP4-208ENST00000489554 SHROOM3Q8TF72 1996 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PCNX2A6NKB5 2137 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 C16orf96A6NNT2 1141 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 CCDC188H7C350 402 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 RNF103O00237 685 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms