RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ICE2Q659A1 982 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 SLC8B1Q6J4K2 584 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 FUT10Q6P4F1 479 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 MTDHQ86UE4 582 aaKnown RBP8.54□□□□□ -1.04
VTI1A-207ENST00000489357 ZC3HC1Q86WB0 502 aaKnown RBP8.54□□□□□ -1.04
VTI1A-207ENST00000489357 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 BBS5Q8N3I7 341 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 DCLK2Q8N568 766 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 CCDC33Q8N5R6 958 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 FBXO32Q969P5 355 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 SLC7A6OSQ96CW6 309 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-207ENST00000489357 CCDC126Q96EE4 140 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 TMEM169Q96HH4 297 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 NSL1Q96IY1 281 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 VPS39Q96JC1 886 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 HERC2P3Q9BVR0 1158 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 CEP41Q9BYV8 373 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 C1orf21Q9H246 121 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 NSUN3Q9H649 340 aaKnown RBP8.54□□□□□ -1.04
VTI1A-207ENST00000489357 NOD2Q9HC29 1040 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 TREX1Q9NSU2 369 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 RBM22Q9NW64 420 aaKnown RBP eCLIP8.54□□□□□ -1.04
VTI1A-207ENST00000489357 MARCH2Q9P0N8 246 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 THEGQ9P2T0 379 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 SFMBT1Q9UHJ3 866 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 TLK1Q9UKI8 766 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 EMCNQ9ULC0 261 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 TCAF1Q9Y4C2 921 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 NOTCH4Q99466 2003 aa8.54□□□□□ -1.04
VTI1A-207ENST00000489357 GREB1Q4ZG55 1949 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 A0A087X1B8 175 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 A0A096LPK6 155 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 CCDC189A1A4V9 331 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 HIDE1A8MVS5 230 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SLC22A2O15244 555 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SLC7A4O43246 635 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MSI1O43347 362 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 TRIM13O60858 407 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 KLHL2O95198 593 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 LATS1O95835 1130 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PEX11BO96011 259 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 RALBP11234 206 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 FGF3P11487 239 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 AOC1P19801 751 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 HLA-DPA1P20036 260 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SERPINB3P29508 390 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 ADSLP30566 484 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SLC1A6P48664 564 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SLC11A2P49281 568 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 KCNJ2P63252 427 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 POU4F1Q01851 419 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 TLR1Q15399 786 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 DUSP6Q16828 381 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 DNAL1Q4LDG9 190 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 HSP90AA5PQ58FG0 334 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 TCEAL5Q5H9L2 206 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 CERCAMQ5T4B2 595 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PIK3R6Q5UE93 754 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 TPGS2Q68CL5 300 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 DENND5AQ6IQ26 1287 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 KDELC1Q6UW63 502 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 ADGRD2Q7Z7M1 963 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 ARID3BQ8IVW6 561 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 C2CD4AQ8NCU7 369 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 RFWD2Q8NHY2 731 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SLC22A17Q8WUG5 538 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PDCD6IPQ8WUM4 868 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MFSD3Q96ES6 412 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PTCD3Q96EY7 689 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 TSPAN17Q96FV3 270 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 CELF6Q96J87 481 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 CDCA3Q99618 268 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 DDX50Q9BQ39 737 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 BTBD10Q9BSF8 475 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 GRIP2Q9C0E4 1043 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MAGEH1Q9H213 219 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SP110Q9HB58 689 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 NMRAL1Q9HBL8 299 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 CHRAC1Q9NRG0 131 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.53□□□□□ -1.049e-7■■■■□ 22.5
VTI1A-207ENST00000489357 GMIPQ9P107 970 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MTRRQ9UBK8 725 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 ZNF212Q9UDV6 495 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MAGED2Q9UNF1 606 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PRG3Q9Y2Y8 225 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 PSAT1Q9Y617 370 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MYO18AQ92614 2054 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 NYNRINQ9P2P1 1898 aaKnown RBP8.53□□□□□ -1.04
VTI1A-207ENST00000489357 MYO10Q9HD67 2058 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 SHROOM3Q8TF72 1996 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CXorf51AA0A1B0GTR3 108 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms