RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 HEATR9A2RTY3 570 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 SLC9A3R1O14745 358 aaPredicted RBP12.82□□□□□ -0.36
NELFE-209ENST00000488426 INSIG1O15503 277 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 SNAP91O60641 907 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 CD160O95971 181 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 PENKP01210 267 aaPredicted RBP12.82□□□□□ -0.36
NELFE-209ENST00000488426 PAMP19021 973 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 NMBRP28336 390 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 CHRNA4P43681 627 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 PTPN5P54829 565 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 STARD6P59095 220 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 CDK18Q07002 472 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 NSUN2Q08J23 767 aaKnown RBP eCLIP12.82□□□□□ -0.36
NELFE-209ENST00000488426 DNAJC3Q13217 504 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 LAMB3Q13751 1172 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 PDPK2PQ6A1A2 396 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 TTC19Q6DKK2 380 aaPredicted RBP12.82□□□□□ -0.36
NELFE-209ENST00000488426 ARID3BQ8IVW6 561 aaPredicted RBP12.82□□□□□ -0.36
NELFE-209ENST00000488426 UNC5BQ8IZJ1 945 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 RIN3Q8TB24 985 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 BHMTQ93088 406 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 SGSM3Q96HU1 749 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 CPNE1Q99829 537 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
NELFE-209ENST00000488426 NSMCE4AQ9NXX6 385 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 ACTL7AQ9Y615 435 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 UGT1A9O60656 530 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
NELFE-209ENST00000488426 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
NELFE-209ENST00000488426 ERVK-10P10266 1014 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 KRT4P19013 534 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 NUMBP49757 651 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 LMAN2Q12907 356 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 SIRPB2Q5JXA9 342 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 PACS1Q6VY07 963 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 NLRP9Q7RTR0 991 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 KDELC2Q7Z4H8 507 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 KCNMB4Q86W47 210 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 SLC25A41Q8N5S1 370 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 CELF5Q8N6W0 485 aaKnown RBP12.81□□□□□ -0.36
NELFE-209ENST00000488426 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 CCDC134Q9H6E4 229 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 UGT1A7Q9HAW7 530 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 UGT1A10Q9HAW8 530 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 UGT1A8Q9HAW9 530 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 NOD2Q9HC29 1040 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 TXNDC16Q9P2K2 825 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 LHX3Q9UBR4 397 aa12.81□□□□□ -0.36
NELFE-209ENST00000488426 TTC24A2A3L6 582 aaPredicted RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 HEPACAM2A8MVW5 462 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TRIM49D1C9J1S8 452 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TYROBPO43914 113 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 NDST3O95803 873 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 GP5P40197 560 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 RGRP47804 291 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 SCNN1BP51168 640 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 MSLNQ13421 630 aaPredicted RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 FZD5Q13467 585 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 PLEKHG6Q3KR16 790 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 GRTP1Q5TC63 336 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 KIAA0930Q6ICG6 404 aaPredicted RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 APCDD1Q8J025 514 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 C4orf33Q8N1A6 199 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 IRF7Q92985 503 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 ZFYVE19Q96K21 471 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 LMLNQ96KR4 655 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TRIB3Q96RU7 358 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TREX1Q9NSU2 369 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 C20orf96Q9NUD7 363 aaPredicted RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 PLK2Q9NYY3 685 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 MARK1Q9P0L2 795 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 SIT1Q9Y3P8 196 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 GJB3O75712 270 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 ZWINTO95229 277 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 CA4P22748 312 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 GDI1P31150 447 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 RHOAP61586 193 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 SEPT6Q14141 434 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 MPP2Q14168 576 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TEDDM1Q5T9Z0 273 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 ANKRD42Q8N9B4 389 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 BANPQ8N9N5 519 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 PJA1Q8NG27 643 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 PEX13Q92968 403 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 ZNF778Q96MU6 729 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
NELFE-209ENST00000488426 BBS2Q9BXC9 721 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 EPN3Q9H201 632 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 TRPV4Q9HBA0 871 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms