RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 V9GYY5 206 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 C2orf81A6NN90 581 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 KPNA3O00505 521 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-242ENST00000488013 TP73O15350 636 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 SLC7A4O43246 635 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PAPSS2O95340 614 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-242ENST00000488013 DNTTP04053 509 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 ATXN1LP0C7T5 689 aaKnown RBP11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PAMP19021 973 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 ADRA1DP25100 572 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 VSNL1P62760 191 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 ELP6Q0PNE2 266 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 TRAF2Q12933 501 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CRY1Q16526 586 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 UGP2Q16851 508 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CCDC38Q502W7 563 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 SIRPB2Q5JXA9 342 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 FBXL19Q6PCT2 694 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 KBTBD6Q86V97 674 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CAND1Q86VP6 1230 aaKnown RBP11.11□□□□□ -0.63
HDLBP-242ENST00000488013 SFTPA1Q8IWL2 248 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 SPEM1Q8N4L4 309 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CHST14Q8NCH0 376 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PPHLN1Q8NEY8 458 aaKnown RBP11.11□□□□□ -0.63
HDLBP-242ENST00000488013 LPCAT1Q8NF37 534 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PJA1Q8NG27 643 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 OR52K1Q8NGK4 314 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 OR6K2Q8NGY2 324 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PIP4K2CQ8TBX8 421 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 GRIN3AQ8TCU5 1115 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PYROXD1Q8WU10 500 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 PIH1D2Q8WWB5 315 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CAVIN3Q969G5 261 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 SCRN2Q96FV2 425 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 KLHL32Q96NJ5 620 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 MCCC1Q96RQ3 725 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-242ENST00000488013 FAM129BQ96TA1 746 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 ACOX2Q99424 681 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CDH19Q9H159 772 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CHRDQ9H2X0 955 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 KCTD5Q9NXV2 234 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 RIMKLBQ9ULI2 386 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 CHKBQ9Y259 395 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 NCKAP1Q9Y2A7 1128 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 REV3LO60673 3130 aa11.11□□□□□ -0.63
HDLBP-242ENST00000488013 KIF26AQ9ULI4 1882 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 DOCK4Q8N1I0 1966 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 A0A0J9YYE9 177 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 A0A1W2PQF6 199 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 TCRBV7S3A2A0A539 114 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 RGSL1A5PLK6 1076 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 C16orf96A6NNT2 1141 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 UPK3BL1B0FP48 263 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 UPK3BL2E5RIL1 263 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 F5H423 210 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 GOLGA8MH3BSY2 632 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ADAM23O75077 832 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PIGNO95427 931 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PRLP01236 227 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 TRBC1P01850 177 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 POLBP06746 335 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 UQCRHP07919 91 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ACADMP11310 421 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF30P17039 623 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PGAM1P18669 254 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 CD72P21854 359 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ECHS1P30084 290 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SLC8A1P32418 973 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PHBP35232 272 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 NEK3P51956 506 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PTPN5P54829 565 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SESN2P58004 480 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SATB1Q01826 763 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ILF2Q12905 390 aaKnown RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PDIA2Q13087 525 aaKnown RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SPARCL1Q14515 664 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 TRADDQ15628 312 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 CST6Q15828 149 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 QPCTQ16769 361 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SKIDA1Q1XH10 827 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 BBS9Q3SYG4 887 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 CASC4Q6P4E1 433 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF449Q6P9G9 518 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 TRIM67Q6ZTA4 783 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 CYS1Q717R9 158 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 ERN2Q76MJ5 926 aaKnown RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 TTC7BQ86TV6 843 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 TMPRSS6Q8IU80 811 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 MMAAQ8IVH4 418 aaKnown RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PALM2Q8IXS6 379 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SLC25A41Q8N5S1 370 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 CAMKK1Q8N5S9 505 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 STAMBPL1Q96FJ0 436 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 SIPA1Q96FS4 1042 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms