RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 EFCAB1Q9HAE3 211 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 CLCN5P51795 746 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 AQP4P55087 323 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 IL10RBQ08334 325 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 FAM171A1Q5VUB5 890 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 FAM43BQ6ZT52 329 aaPredicted RBP26.28■■□□□ 1.8
HLA-C-208ENST00000487245 TFAP2DQ7Z6R9 452 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 ZFAND2BQ8WV99 257 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 ATXN3LQ9H3M9 355 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 IGSF5Q9NSI5 407 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 MARCH2Q9P0N8 246 aa26.28■■□□□ 1.8
HLA-C-208ENST00000487245 DOCK4Q8N1I0 1966 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 CD1EP15812 388 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 VCLP18206 1134 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 CHRNA4P43681 627 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 KPNA1P52294 538 aaPredicted RBP26.27■■□□□ 1.8
HLA-C-208ENST00000487245 RING1Q06587 406 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 SLC14A2Q15849 920 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 PSMD5Q16401 504 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 PARP15Q460N3 678 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 ABI1Q8IZP0 508 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 TXNDC5Q8NBS9 432 aaKnown RBP26.27■■□□□ 1.8
HLA-C-208ENST00000487245 ATAD1Q8NBU5 361 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 DLG3Q92796 817 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 RCN3Q96D15 328 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 TSPAN17Q96FV3 270 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 CATSPER2Q96P56 530 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 SRRDQ9UH36 339 aa26.27■■□□□ 1.8
HLA-C-208ENST00000487245 J3KR12 359 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 SDHDO14521 159 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 AP1G1O43747 822 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 CPB1P15086 417 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 CD86P42081 329 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 CLCN2P51788 898 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 YBEYP58557 167 aaPredicted RBP26.26■■□□□ 1.79
HLA-C-208ENST00000487245 PFKPQ01813 784 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 LAMB3Q13751 1172 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 ALFQ53S48 1182 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 FBXL22Q6P050 247 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 SLC30A9Q6PML9 568 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 KDELC2Q7Z4H8 507 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 ST13P4Q8IZP2 240 aaPredicted RBP26.26■■□□□ 1.79
HLA-C-208ENST00000487245 HIPK4Q8NE63 616 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 HEXDCQ8WVB3 486 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 CDRT15Q96T59 188 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 UTP6Q9NYH9 597 aaKnown RBP26.26■■□□□ 1.79
HLA-C-208ENST00000487245 TTC3P53804 2025 aa26.26■■□□□ 1.79
HLA-C-208ENST00000487245 CNTN5O94779 1100 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 IGLV3-27P01718 113 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ZCCHC18P0CG32 403 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 FGFR3P22607 806 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ALDH1A3P47895 512 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 LEPRP48357 1165 aaKnown RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 THOP1P52888 689 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 PGGT1BP53609 377 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 SLC10A7Q0GE19 358 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ZNF460Q14592 562 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 TECRLQ5HYJ1 363 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 C10orf120Q5SQS8 335 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 CHSY3Q70JA7 882 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 PELI3Q8N2H9 469 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 GALNT15Q8N3T1 639 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 CEP70Q8NHQ1 597 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 TADA1Q96BN2 335 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 PABPC5Q96DU9 382 aaKnown RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 OMDQ99983 421 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 COPG1Q9Y678 874 aaKnown RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ENO4A6NNW6 628 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 KIF3CO14782 793 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 SLC7A4O43246 635 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ALDH2P05091 517 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 JUNP05412 331 aaKnown RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 HAPLN1P10915 354 aaPredicted RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 MAPKAPK2P49137 400 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 CAP1Q01518 475 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 GPR17Q13304 367 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 NAIF1Q69YI7 327 aaPredicted RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 TRIM67Q6ZTA4 783 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ICA1LQ8NDH6 482 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 CATSPER1Q8NEC5 780 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 DDX50Q9BQ39 737 aaKnown RBP26.25■■□□□ 1.79
HLA-C-208ENST00000487245 WDR41Q9HAD4 459 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 ACSS2Q9NR19 701 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 DTNAQ9Y4J8 743 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 PCDHB7Q9Y5E2 793 aa26.25■■□□□ 1.79
HLA-C-208ENST00000487245 SLC12A8A0AV02 714 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 RAMP2O60895 175 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 CAPNS1P04632 268 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 MMP2P08253 660 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 ME2P23368 584 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 GALNT1Q10472 559 aaPredicted RBP26.24■■□□□ 1.79
HLA-C-208ENST00000487245 ELAVL2Q12926 359 aaKnown RBP26.24■■□□□ 1.79
HLA-C-208ENST00000487245 TAF10Q12962 218 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 FLOT2Q14254 428 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 POLD3Q15054 466 aaPredicted RBP26.24■■□□□ 1.79
HLA-C-208ENST00000487245 FAM83EQ2M2I3 478 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 TMEM198Q66K66 360 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 RAP1GAP2Q684P5 730 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 NXNQ6DKJ4 435 aa26.24■■□□□ 1.79
HLA-C-208ENST00000487245 ZNF354CQ86Y25 554 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms