RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TUBGCP5Q96RT8 1024 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 CINPQ9BW66 212 aaPredicted RBP24.74■■□□□ 1.55
LIME1-206ENST00000487026 RAI2Q9Y5P3 530 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 LRRK1Q38SD2 2015 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 TTC24A2A3L6 582 aaPredicted RBP24.73■■□□□ 1.55
LIME1-206ENST00000487026 EME2A4GXA9 379 aaPredicted RBP24.73■■□□□ 1.55
LIME1-206ENST00000487026 LMO7DNF2Z398 122 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 CASC3O15234 703 aaKnown RBP24.73■■□□□ 1.55
LIME1-206ENST00000487026 RRP8O43159 456 aaKnown RBP24.73■■□□□ 1.55
LIME1-206ENST00000487026 LZTS3O60299 673 aaPredicted RBP24.73■■□□□ 1.55
LIME1-206ENST00000487026 ANXA6P08133 673 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 TCF4P15884 667 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 IL1R2P27930 398 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 ACTN2P35609 894 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 MMP12P39900 470 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 CSNK1DP48730 415 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 NR0B2Q15466 257 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 PERM1Q5SV97 790 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 RD3Q7Z3Z2 195 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 SLC35F3Q8IY50 421 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 SNIP1Q8TAD8 396 aaKnown RBP24.73■■□□□ 1.55
LIME1-206ENST00000487026 APOOQ9BUR5 198 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 BOCQ9BWV1 1114 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 ATP13A3Q9H7F0 1226 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 ATP8A1Q9Y2Q0 1164 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 OR1A2Q9Y585 309 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 SCINQ9Y6U3 715 aa24.73■■□□□ 1.55
LIME1-206ENST00000487026 TOR1BO14657 336 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 PCCBP05166 539 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 SERPINA4P29622 427 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 HCAR3P49019 387 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 IL10RBQ08334 325 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 CCDC173Q0VFZ6 552 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 DPYSQ14117 519 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 TBC1D25Q3MII6 688 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 ENPP7Q6UWV6 458 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 PSTKQ8IV42 348 aaKnown RBP24.72■■□□□ 1.55
LIME1-206ENST00000487026 PAF1Q8N7H5 531 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 FUCA2Q9BTY2 467 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 EDEM3Q9BZQ6 932 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 ISCUQ9H1K1 167 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 ETNK2Q9NVF9 386 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 NCKIPSDQ9NZQ3 722 aa24.72■■□□□ 1.55
LIME1-206ENST00000487026 A8MX80 341 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 AMPD1P23109 780 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 PEX5P50542 639 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 SCNN1BP51168 640 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 GABREP78334 506 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 BCL2L1Q07817 233 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 ALG11Q2TAA5 492 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 SMTNL2Q2TAL5 461 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 C6orf132Q5T0Z8 1188 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 PLA2G15Q8NCC3 412 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 HSPH1Q92598 858 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.71■■□□□ 1.55
LIME1-206ENST00000487026 ZWILCHQ9H900 591 aa24.71■■□□□ 1.55
LIME1-206ENST00000487026 MRPL47Q9HD33 250 aaKnown RBP24.71■■□□□ 1.55
LIME1-206ENST00000487026 TMEM110-MUSTN1A8MSY1 372 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 MYBL1P10243 752 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 HK3P52790 923 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 NSUN2Q08J23 767 aaKnown RBP eCLIP24.7■■□□□ 1.54
LIME1-206ENST00000487026 SLC10A7Q0GE19 358 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 ISXQ2M1V0 245 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 HGSNATQ68CP4 663 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 KCTD16Q68DU8 428 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 GLMNQ92990 594 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 TRIM11Q96F44 468 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 NAF1Q96HR8 494 aaKnown RBP24.7■■□□□ 1.54
LIME1-206ENST00000487026 GULP1Q9UBP9 304 aa24.7■■□□□ 1.54
LIME1-206ENST00000487026 CTSEP14091 401 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 HTR1BP28222 390 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 PCK1P35558 622 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 RPIAP49247 311 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 RALGDSQ12967 914 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 RFTN1Q14699 578 aaPredicted RBP24.69■■□□□ 1.54
LIME1-206ENST00000487026 LBRQ14739 615 aaKnown RBP24.69■■□□□ 1.54
LIME1-206ENST00000487026 NFATC4Q14934 902 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 TDRD12Q587J7 1177 aaKnown RBP24.69■■□□□ 1.54
LIME1-206ENST00000487026 LUZP1Q86V48 1076 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 ECHDC3Q96DC8 303 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 BTBD6Q96KE9 485 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 TBATAQ96M53 351 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 CBX8Q9HC52 389 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 SIRPGQ9P1W8 387 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 PADI4Q9UM07 663 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 DOLKQ9UPQ8 538 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 RP1P56715 2156 aa24.69■■□□□ 1.54
LIME1-206ENST00000487026 BPTFQ12830 3046 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 H3BRJ5 948 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 TRAFD1O14545 582 aaPredicted RBP24.68■■□□□ 1.54
LIME1-206ENST00000487026 RECQL5O94762 991 aaPredicted RBP24.68■■□□□ 1.54
LIME1-206ENST00000487026 LSSP48449 732 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 BLKP51451 505 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 ZNF135P52742 658 aaPredicted RBP24.68■■□□□ 1.54
LIME1-206ENST00000487026 SRP54P61011 504 aaKnown RBP24.68■■□□□ 1.54
LIME1-206ENST00000487026 FANCCQ00597 558 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 AGERQ15109 404 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 TXNRD3NBQ6F5E7 133 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 LIPIQ6XZB0 460 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 POLNQ7Z5Q5 900 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms