RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TCAF1Q9Y4C2 921 aa14.72□□□□□ -0.05
POLR2J3-204ENST00000486319 ZNF318Q5VUA4 2279 aa14.72□□□□□ -0.05
POLR2J3-204ENST00000486319 LOC285095A0A1B0GVY8 99 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 HEATR9A2RTY3 570 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 SHISA7A6NL88 538 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 CBX4O00257 560 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 UGT1A9O60656 530 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 EPOP01588 193 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 ERVK-10P10266 1014 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 TCF3P15923 654 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 PAMP19021 973 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 NMBRP28336 390 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 GP5P40197 560 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 SOX9P48436 509 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 SERPINH1P50454 418 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 USP4Q13107 963 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 RUNX3Q13761 415 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 PDGFRLQ15198 375 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 SLC1A5Q15758 541 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 SEPT7Q16181 437 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 PDPK2PQ6A1A2 396 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 TIFABQ6ZNK6 161 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 KCNMB4Q86W47 210 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 RALGPS2Q86X27 583 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 DTWD2Q8NBA8 298 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 PRSS33Q8NF86 280 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 DDI1Q8WTU0 396 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 OSCP1Q8WVF1 389 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 CKAP2Q8WWK9 683 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 IFT43Q96FT9 208 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 APOPT1Q96IL0 206 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 FEM1CQ96JP0 617 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 SERAC1Q96JX3 654 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 CCT8L2Q96SF2 557 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 UGT1A7Q9HAW7 530 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 UGT1A10Q9HAW8 530 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 UGT1A8Q9HAW9 530 aa14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 C20orf96Q9NUD7 363 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 NUP210Q8TEM1 1887 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-204ENST00000486319 ERICH4A6NGS2 130 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 SPECC1L-ADORA2AF8WAN1 911 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 MUSKO15146 869 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 ASMTLO95671 621 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 CYBBP04839 570 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 ARSAP15289 507 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 HLA-DPA1P20036 260 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 GLDCP23378 1020 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 TARSP26639 723 aaKnown RBP14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 CTHP32929 405 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 RPA3P35244 121 aaPredicted RBP14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 PTPN5P54829 565 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 LAMB3Q13751 1172 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 ZSCAN26Q16670 478 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 INO80DQ53TQ3 878 aaPredicted RBP14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 SH2D5Q6ZV89 423 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 KDELC2Q7Z4H8 507 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 MFN1Q8IWA4 741 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 BBS7Q8IWZ6 715 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 MAGEB18Q96M61 343 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 FEM1AQ9BSK4 669 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 HPS4Q9NQG7 708 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 MKS1Q9NXB0 559 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 DLGAP2Q9P1A6 1054 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 VPS28Q9UK41 221 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 WNT6Q9Y6F9 365 aa14.71□□□□□ -0.06
POLR2J3-204ENST00000486319 OTOL1A6NHN0 477 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 GOLGA8RI6L899 631 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 SCAMP3O14828 347 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 RFPL1O75677 317 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 FGF1P05230 155 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 PYGBP11216 843 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 SPRP35270 261 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 CCNFP41002 786 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 CHRNA4P43681 627 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 CSE1LP55060 971 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 WDR4P57081 412 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 ARF5P84085 180 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 CDK18Q07002 472 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 TCF15Q12870 199 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 BMPR2Q13873 1038 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 CYTH1Q15438 398 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 FSCBQ5H9T9 825 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 TEDDM1Q5T9Z0 273 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 MROH9Q5TGP6 573 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 HHATQ5VTY9 493 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 NLRP9Q7RTR0 991 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 CPLX4Q7Z7G2 160 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 SLC25A41Q8N5S1 370 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 DCAF4L2Q8NA75 395 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 TCP10LQ8TDR4 215 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 ACMSDQ8TDX5 336 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 ZNF473Q8WTR7 871 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 ATP2A3Q93084 1043 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 ZNF317Q96PQ6 595 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 KLF6Q99612 283 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 IQCGQ9H095 443 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 NSRP1Q9H0G5 558 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 IRF2BPLQ9H1B7 796 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 LINC00597Q9H2U6 94 aa14.7□□□□□ -0.06
POLR2J3-204ENST00000486319 RABEP2Q9H5N1 569 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms