RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 RARBP10826 455 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 HPGDP15428 266 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TCP1P17987 556 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PRKACBP22694 351 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ANXA13P27216 316 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PRDX5P30044 214 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CDC25AP30304 524 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TM4SF1P30408 202 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ACSL1P33121 698 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 HNF1BP35680 557 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 GP5P40197 560 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 EIF2DP41214 584 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 LUMP51884 338 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 HSPA2P54652 639 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 YWHAZP63104 245 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 RPP38P78345 283 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TFAP4Q01664 338 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 DBPQ10586 325 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC12A1Q13621 1099 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 GIT2Q14161 759 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 HABP2Q14520 560 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NONOQ15233 471 aaKnown RBP eCLIP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 MAN2A1Q16706 1144 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 AAK1Q2M2I8 961 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 AARDQ4LEZ3 155 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ZCWPW2Q504Y3 356 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 GLE1Q53GS7 698 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 XKR3Q5GH77 459 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 KLHDC7AQ5VTJ3 777 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SNX30Q5VWJ9 437 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SLFN13Q68D06 897 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PDPK2PQ6A1A2 396 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 FSTL4Q6MZW2 842 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 EMBQ6PCB8 327 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PAPD4Q6PIY7 484 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC2A7Q6PXP3 512 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRC55Q6ZSA7 311 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 C16orf59Q7L2K0 433 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SZRD1Q7Z422 152 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NEK8Q86SG6 692 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TUSC5Q8IXB3 177 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CISD2Q8N5K1 135 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CSGALNACT2Q8N6G5 542 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 KIAA0895Q8NCT3 520 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NEK11Q8NG66 645 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 AENQ8WTP8 325 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 DDI1Q8WTU0 396 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 JADE3Q92613 823 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CELF1Q92879 486 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CAVIN3Q969G5 261 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM162AQ96A26 154 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SGK3Q96BR1 496 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ZBTB9Q96C00 473 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 C11orf24Q96F05 449 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CYFIP2Q96F07 1278 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 APIPQ96GX9 242 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF764Q96H86 408 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 WRNIP1Q96S55 665 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 BCL7BQ9BQE9 202 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TMEM47Q9BQJ4 181 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PACSIN1Q9BY11 444 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 STK33Q9BYT3 514 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 RIOX1Q9H6W3 641 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SH2D4AQ9H788 454 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NHEJ1Q9H9Q4 299 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ZMAT3Q9HA38 289 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SMURF1Q9HCE7 757 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 C6orf50Q9HD87 102 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SAYSD1Q9NPB0 183 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC35C2Q9NQQ7 365 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ADAM29Q9UKF5 820 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 BAG5Q9UL15 447 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC39A10Q9ULF5 831 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SNX12Q9UMY4 172 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 USP15Q9Y4E8 981 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 DDX60LQ5H9U9 1706 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ATXN2Q99700 1313 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 BAZ2AQ9UIF9 1905 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 IGKV6D-41A0A0C4DH26 115 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GOLGA6L7A0A1B0GV03 622 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MAGEB16A2A368 324 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRD1A4D1F6 860 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GRID2IPA4D2P6 1211 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 EME2A4GXA9 379 aaPredicted RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TRIM49BA6NDI0 452 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 PRAMEF25A6NGN4 478 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 BTNL10A8MVZ5 291 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 KLRF2D3W0D1 207 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 NPIPB8E9PQR5 432 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 H0Y858 1186 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 AGPSO00116 658 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF263O14978 683 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 VILLO15195 856 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CIDEAO60543 219 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TACC1O75410 805 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 IL18RAPO95256 599 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GNA14O95837 355 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ATP1A1P05023 1023 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 RB1P06400 928 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TPBGLP0DKB5 382 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms