RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
CUX1-208ENST00000485792 EPG5Q9HCE0 2579 aa5.8□□□□□ -1.48
CUX1-208ENST00000485792 SNRNP200O75643 2136 aaKnown RBP5.8□□□□□ -1.48
CUX1-208ENST00000485792 IGF2RP11717 2491 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 CDC14CA4D256 554 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 H0Y8X5 98 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 KHNYNO15037 678 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 VILLO15195 856 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 BCAT2O15382 392 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 HTRA2O43464 458 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 CREB3O43889 395 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 AKR1B10O60218 316 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 BUB1BO60566 1050 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 RNGTTO60942 597 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 CBFA2T3O75081 653 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 LEFTY1O75610 366 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 TMCC1O94876 653 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 NDUFA10O95299 355 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 PIGNO95427 931 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 POP4O95707 220 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 IL1BP01584 269 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 GIMD1P0DJR0 217 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ACADMP11310 421 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 CD59P13987 128 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 DESP17661 470 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ENGP17813 658 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 CSRP1P21291 193 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 AMPD1P23109 780 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 KDELR1P24390 212 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SLC1A1P43005 524 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 DHPSP49366 369 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 PAPOLAP51003 745 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 SUOXP51687 545 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 TPI1P60174 286 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SNRPD1P62314 119 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 RACK1P63244 317 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 SEMG2Q02383 582 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 GBE1Q04446 702 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 GALNT2Q10471 571 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 RALGDSQ12967 914 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 LBRQ14739 615 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 PDK2Q15119 407 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 RSPO4Q2I0M5 234 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 ZNF423Q2M1K9 1284 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ZNF284Q2VY69 593 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 MYLK3Q32MK0 819 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ANKRD20A8PQ5CZ79 823 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ZNF805Q5CZA5 627 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 TRIM61Q5EBN2 209 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 RALGPS1Q5JS13 557 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SYCP2LQ5T4T6 812 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 TMCO4Q5TGY1 634 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SEL1L3Q68CR1 1132 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 KIAA0895LQ68EN5 471 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SLC9A4Q6AI14 798 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 RWDD4Q6NW29 188 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 NCEH1Q6PIU2 408 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 RIPOR1Q6ZS17 1223 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ERN2Q76MJ5 926 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SPATS2Q86XZ4 545 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 TMTC1Q8IUR5 882 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SLC22A18ASQ8N1D0 253 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 HDDC3Q8N4P3 179 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 LRRC57Q8N9N7 239 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 GRIN3AQ8TCU5 1115 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 PIGKQ92643 395 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 RAB7BQ96AH8 199 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SLC6A18Q96N87 628 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 LENG8Q96PV6 779 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 KLF6Q99612 283 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 HEPHQ9BQS7 1158 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 DESI2Q9BSY9 194 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 OSBPL1AQ9BXW6 950 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ZWILCHQ9H900 591 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 ERVMER34-1Q9H9K5 563 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 PREBQ9HCU5 417 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 FZD3Q9NPG1 666 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.79□□□□□ -1.48
CUX1-208ENST00000485792 ZNHIT6Q9NWK9 470 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 SUSD2Q9UGT4 822 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 SEPT3Q9UH03 358 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 IL36AQ9UHA7 158 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 AMACRQ9UHK6 382 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 BTBD3Q9Y2F9 522 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 FNDC3AQ9Y2H6 1198 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 PPIL1Q9Y3C6 166 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 FADS3Q9Y5Q0 445 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 EPN1Q9Y6I3 576 aaPredicted RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 CAPN6Q9Y6Q1 641 aa5.79□□□□□ -1.48
CUX1-208ENST00000485792 DSPP15924 2871 aaKnown RBP5.79□□□□□ -1.48
CUX1-208ENST00000485792 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 A0A1W2PNR3 127 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CFAP69A5D8W1 941 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ARHGAP42A6NI28 874 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 LRRC72A6NJI9 287 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 C16orf96A6NNT2 1141 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 C1QTNF3-AMACRE9PGA6 284 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 H3BRJ5 948 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 PCDHGA12O60330 932 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms