RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 POU6F1Q14863 301 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 NT5DC1Q5TFE4 455 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 MFSD5Q6N075 450 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SLC2A7Q6PXP3 512 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GK5Q6ZS86 529 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 DSG4Q86SJ6 1040 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 C2orf40Q9H1Z8 148 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ATXN3LQ9H3M9 355 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SLA2Q9H6Q3 261 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CHST7Q9NS84 486 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 HOXC10Q9NYD6 342 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 DCAF8L1A6NGE4 600 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PIAS1O75925 651 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GCP02774 474 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CLCA4Q14CN2 919 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 STILQ15468 1287 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 LIPMQ5VYY2 423 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SLC22A8Q8TCC7 542 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ANKRA2Q9H9E1 313 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PCDHB16Q9NRJ7 776 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 IRGMA1A4Y4 181 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 E9PAM4 449 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 MSH4O15457 936 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 OIP5O43482 229 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 OR2B3O76000 313 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CTSKP43235 329 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 UGT2B15P54855 530 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SMARCB1Q12824 385 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ARMC6Q6NXE6 501 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 LRRC69Q6ZNQ3 347 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF366Q8N895 744 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GALNT11Q8NCW6 608 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CENPNQ96H22 339 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PNPOQ9NVS9 261 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SCAMP1O15126 338 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 LYPLA1O75608 230 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 DNTTP04053 509 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 KCTD19Q17RG1 926 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CCDC120Q96HB5 630 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CDADC1Q9BWV3 514 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 RAP2CQ9Y3L5 183 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CSADQ9Y600 493 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 RPTORQ8N122 1335 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 HDAC3O15379 428 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 CSH1P0DML2 217 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 CSH2P0DML3 217 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ITGA2P17301 1181 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 NAGLUP54802 743 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 GEMP55040 296 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FSTL1Q12841 308 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 OR7G1Q8NGA0 311 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 METTL6Q8TCB7 284 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 HOPXQ9BPY8 73 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-207ENST00000483888 SNTG1Q9NSN8 517 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 PPM1HQ9ULR3 514 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 GJA3Q9Y6H8 435 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FXYD6-FXYD2A0A087WZ82 144 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 CUL2Q13617 745 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 CCDC58Q4VC31 144 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 KIAA1841Q6NSI8 718 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TNS4Q8IZW8 715 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TCTEX1D2Q8WW35 142 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 KAT2AQ92830 837 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FXYD6Q9H0Q3 95 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 DCSTAMPQ9H295 470 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ACTR8Q9H981 624 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 USP17L10C9JJH3 530 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 RNASEH1O60930 286 aaKnown RBP10.29□□□□□ -0.76
COL12A1-207ENST00000483888 RAD17O75943 681 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 SNX4O95219 450 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 NPPAP01160 153 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 GLRA2P23416 452 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TRAPPC3LQ5T215 181 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 KCND2Q9NZV8 630 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 UPB1Q9UBR1 384 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 RRN3P2A6NIE6 340 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF705EA8MWA4 302 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-207ENST00000483888 L7N2F9 121 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 WWP2O00308 870 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 GLP2RO95838 553 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 CD97P48960 835 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 RGS19P49795 217 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ALX1Q15699 326 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 MAPKAPK3Q16644 382 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 RALGPS1Q5JS13 557 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 NMRK2Q9NPI5 230 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 MAGEL2Q9UJ55 1249 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF225Q9UK10 706 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 POMPQ9Y244 141 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FAM50BQ9Y247 325 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 A0A1W2PPM1 405 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FBXO21O94952 628 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ZSCAN5DPP0CG00 497 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 DARSP14868 501 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms