RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 USP12O75317 370 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 AVILO75366 819 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 GJB3O75712 270 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 KRT38O76015 456 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 ATP5BP06576 529 aaKnown RBP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SERPINF2P08697 491 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 EIF2DP41214 584 aaKnown RBP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 WNT3AP56704 352 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 MESP2Q0VG99 397 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 MTM1Q13496 603 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 OLIG2Q13516 323 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 IHHQ14623 411 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 NAPEPLDQ6IQ20 393 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 KDELC1Q6UW63 502 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 LINC00523Q86TU6 105 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 RNF135Q8IUD6 432 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SLC44A3Q8N4M1 653 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 CSGALNACT1Q8TDX6 532 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 APOPT1Q96IL0 206 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 MRGPRX2Q96LB1 330 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 NUDCD1Q96RS6 583 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 NOD2Q9HC29 1040 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 TXLNGQ9NUQ3 528 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 ELOVL2Q9NXB9 296 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SLCO3A1Q9UIG8 710 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 ERVW-1Q9UQF0 538 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 TIMM44O43615 452 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 ASLP04424 464 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SNRPAP09012 282 aaKnown RBP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 TROVE2P10155 538 aaKnown RBP eCLIP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 KDSRQ06136 332 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 BNIP1Q12981 228 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 RIPK1Q13546 671 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 DGKKQ5KSL6 1271 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 PHTF2Q8N3S3 785 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 GSDMBQ8TAX9 411 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 RAB3IL1Q8TBN0 382 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SORCS1Q8WY21 1168 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 ISG20Q96AZ6 181 aaKnown RBP17.31■□□□□ 0.36
MRPL28-210ENST00000483764 TBL1YQ9BQ87 522 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 TUBB6Q9BUF5 446 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 FSD1LQ9BXM9 530 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 SLC40A1Q9NP59 571 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 CASS4Q9NQ75 786 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 KLC4Q9NSK0 619 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 FAM50BQ9Y247 325 aa17.31■□□□□ 0.36
MRPL28-210ENST00000483764 MYO18AQ92614 2054 aaKnown RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 PRRT4C9JH25 899 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 AP3B1O00203 1094 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 KLF11O14901 512 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 ZNF821O75541 412 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 FOXN2P32314 431 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 RPA3P35244 121 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 ADRA1AP35348 466 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 NNMTP40261 264 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 EIF4HQ15056 248 aaKnown RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 SLC14A2Q15849 920 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 PCSK7Q16549 785 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 ACCSLQ4AC99 568 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 PREPLQ4J6C6 727 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 RALGPS1Q5JS13 557 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 HP1BP3Q5SSJ5 553 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 ATXN7L2Q5T6C5 722 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 RANBP10Q6VN20 620 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 TERB1Q8NA31 727 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 CCDC63Q8NA47 563 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 OR52K1Q8NGK4 314 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 CYB5D2Q8WUJ1 264 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 CHFRQ96EP1 664 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 MRGPRX3Q96LB0 322 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 EBNA1BP2Q99848 306 aaKnown RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 PAIP2Q9BPZ3 127 aaKnown RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 APOL2Q9BQE5 337 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 WDR83Q9BRX9 315 aaKnown RBP17.3■□□□□ 0.36
MRPL28-210ENST00000483764 FICDQ9BVA6 458 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 TM6SF2Q9BZW4 377 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 CEP44Q9C0F1 390 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 TRPV5Q9NQA5 729 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 PHTF1Q9UMS5 762 aa17.3■□□□□ 0.36
MRPL28-210ENST00000483764 TBC1D3BA6NDS4 549 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 ATP9BO43861 1147 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 SPAG7O75391 227 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 BANF1O75531 89 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 TGDSO95455 350 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 SRPRAP08240 638 aaKnown RBP17.29■□□□□ 0.36
MRPL28-210ENST00000483764 HNRNPH1P31943 449 aaKnown RBP17.29■□□□□ 0.36
MRPL28-210ENST00000483764 CSNK1DP48730 415 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 VASPP50552 380 aaPredicted RBP17.29■□□□□ 0.36
MRPL28-210ENST00000483764 RASSF2P50749 326 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 CDH17Q12864 832 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 DLG2Q15700 870 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 C22orf39Q6P5X5 142 aa17.29■□□□□ 0.36
MRPL28-210ENST00000483764 NCEH1Q6PIU2 408 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms