RNA–Protein interactions for RNA: ENST00000483727.5

ITCH-205, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 1,070 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-205ENST00000483727 HOXA11P31270 313 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 HOXC8P31273 242 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 SLC5A2P31639 672 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RFC1P35251 1148 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 CPA2P48052 419 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 ME1P48163 572 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 TKTL1P51854 596 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RBM5P52756 815 aaKnown RBP eCLIP3.17□□□□□ -1.9
ITCH-205ENST00000483727 ALDH18A1P54886 795 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 STARD6P59095 220 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 MRPS5P82675 430 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 YWHAHQ04917 246 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 MRPL28Q13084 256 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 CBX3Q13185 183 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 MTX1Q13505 466 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 MED22Q15528 200 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 KBTBD12Q3ZCT8 623 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 ZNF628Q5EBL2 1059 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RAB41Q5JT25 222 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 PLEKHS1Q5SXH7 462 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 ERMARDQ5T6L9 678 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 FAXCQ5TGI0 409 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 MRNIPQ6NTE8 343 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 CAVIN1Q6NZI2 390 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 USP17L6PQ6QN14 398 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 SUSD1Q6UWL2 747 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RBM44Q6ZP01 1051 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 RAB11FIP2Q7L804 512 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 METTL23Q86XA0 190 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 LINC00346Q8IVM7 164 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 CNTROBQ8N137 903 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 C10orf53Q8N6V4 93 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 FRMD1Q8N878 549 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 POGLUT1Q8NBL1 392 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 FBXO30Q8TB52 745 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 BICD2Q8TD16 824 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 BCAS4Q8TDM0 211 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 SCFD2Q8WU76 684 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 NSMCE1Q8WV22 266 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 GIMAP1Q8WWP7 306 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 ZNF653Q96CK0 615 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RMDN1Q96DB5 314 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 TRIM44Q96DX7 344 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 SIPA1Q96FS4 1042 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 FER1L6-AS2Q96M78 137 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 GCNAQ96QF7 691 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 NR1H4Q96RI1 486 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 TRMOQ9BU70 441 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 SCNM1Q9BWG6 230 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 APOL6Q9BWW8 343 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RANBP17Q9H2T7 1088 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 SMARCAD1Q9H4L7 1026 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 RMI1Q9H9A7 625 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 MID1IP1Q9NPA3 183 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 LTB4R2Q9NPC1 389 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 SEMA4BQ9NPR2 832 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 POT1Q9NUX5 634 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 CGNQ9P2M7 1197 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 SUCLA2Q9P2R7 463 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 SLC25A10Q9UBX3 287 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 CNOT7Q9UIV1 285 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 HS3ST3B1Q9Y662 390 aa3.17□□□□□ -1.9
ITCH-205ENST00000483727 SIRT4Q9Y6E7 314 aaPredicted RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 EIF4G1Q04637 1599 aaKnown RBP3.17□□□□□ -1.9
ITCH-205ENST00000483727 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 FAM90A10PA6NDY2 464 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 CD8B2A6NJW9 211 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 LIPT2A6NK58 231 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 PSMD14O00487 310 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 PES1O00541 588 aaKnown RBP3.16□□□□□ -1.9
ITCH-205ENST00000483727 PSMD10O75832 226 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 OR2C1O95371 312 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 GCNT3O95395 438 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 TOMM40O96008 361 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 HEXBP07686 556 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 CD63P08962 238 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 SPARCP09486 303 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 ST6GAL1P15907 406 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 TNFRSF1BP20333 461 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 DRD1P21728 446 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 TNFRSF8P28908 595 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 PBLDP30039 288 aaPredicted RBP3.16□□□□□ -1.9
ITCH-205ENST00000483727 AKT1P31749 480 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 IGHMBP2P38935 993 aaKnown RBP3.16□□□□□ -1.9
ITCH-205ENST00000483727 SOX2P48431 317 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 ZNF84P51523 738 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 HTD2P86397 168 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 NSUN2Q08J23 767 aaKnown RBP eCLIP3.16□□□□□ -1.9
ITCH-205ENST00000483727 SEMA3BQ13214 749 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 SGCGQ13326 291 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 ATP1A4Q13733 1029 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 PCLAFQ15004 111 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 CNGA3Q16281 694 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 C2orf76Q3KRA6 126 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 GALNTL6Q49A17 601 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 ZNF484Q5JVG2 852 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 NAA35Q5VZE5 725 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 RINT1Q6NUQ1 792 aa3.16□□□□□ -1.9
ITCH-205ENST00000483727 SLC30A9Q6PML9 568 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms