RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 H0Y858 1186 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 RNF103O00237 685 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 GUCY1B2O75343 617 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CHEK2O96017 543 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 HOXC6P09630 235 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 NAT1P18440 290 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CXCL9Q07325 125 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PIGFQ07326 219 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TRIM32Q13049 653 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TUBA3CQ13748 450 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF460Q14592 562 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 INPP5AQ14642 412 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 POLD3Q15054 466 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 RNF19BQ6ZMZ0 732 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PLEKHG7Q6ZR37 379 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 RPS27LQ71UM5 84 aaKnown RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 ITIH5Q86UX2 942 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 SFRP1Q8N474 314 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TTC30BQ8N4P2 665 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 ATP6V0D2Q8N8Y2 350 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 SLC45A3Q96JT2 553 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 KCTD15Q96SI1 283 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PORCNQ9H237 461 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TP63Q9H3D4 680 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 EIF2B3Q9NR50 452 aaKnown RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PXMP2Q9NR77 195 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TLR9Q9NR96 1032 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TLK1Q9UKI8 766 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 VWA7Q9Y334 891 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 A0A1W2PQ67 120 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 AQP12BA6NM10 295 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 MDM4O15151 490 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PLA2G6O60733 806 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 ABCB7O75027 752 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 RAD17O75943 681 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 MT-ND1P03886 318 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PSAPP07602 524 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 PSMA4P25789 261 aaKnown RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 OSTNP61366 133 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 ARHGEF16Q5VV41 709 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 USP43Q70EL4 1123 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 AQP12AQ8IXF9 295 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CENPLQ8N0S6 344 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 MFSD4AQ8N468 514 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 NRBF2Q96F24 287 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 MYRFLQ96LU7 910 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CSPG4P5Q96PW8 444 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 DGCR6LQ9BY27 220 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TRIM8Q9BZR9 551 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 ZFC3H1O60293 1989 aaKnown RBP11.88□□□□□ -0.51
VTI1A-205ENST00000483122 TIMM44O43615 452 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 BMP4P12644 408 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 HTR1BP28222 390 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SDC4P31431 198 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SOX11P35716 441 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ARL2P36404 184 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 NR2C2P49116 596 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 CSRP3P50461 194 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 GJA9P57773 515 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF667Q5HYK9 610 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SLCO6A1Q86UG4 719 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 KCNMB4Q86W47 210 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 FUNDC1Q8IVP5 155 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 PYROXD2Q8N2H3 581 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 P2RY11Q96G91 374 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 TMEM176AQ96HP8 235 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 FAR2Q96K12 515 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 TSNARE1Q96NA8 513 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 TBCBQ99426 244 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ARPC5LQ9BPX5 153 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SLC25A23Q9BV35 468 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 BCO2Q9BYV7 579 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SNX25Q9H3E2 840 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 RMND5AQ9H871 391 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 LRRC40Q9H9A6 602 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 GBA2Q9HCG7 927 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 FAM49BQ9NUQ9 324 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 GDAP2Q9NXN4 497 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 PCDHGA3Q9Y5H0 932 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 KIAA1217Q5T5P2 1943 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 NEMP2A6NFY4 417 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 MFSD11O43934 449 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 GPC4O75487 556 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SLC35E2BP0CK96 405 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 C7P10643 843 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 MTHFD1P11586 935 aaKnown RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 KCNA2P16389 499 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 IL7RP16871 459 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 YWHAQP27348 245 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 CAPRIN1Q14444 709 aaKnown RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 USP10Q14694 798 aaKnown RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 ANO4Q32M45 955 aa11.87□□□□□ -0.51
VTI1A-205ENST00000483122 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-205ENST00000483122 SLC41A1Q8IVJ1 513 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms