RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 TCAF2A6NFQ2 919 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 TFEBP19484 476 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 EPHX2P34913 555 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 LHX1P48742 406 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 ESRRGP62508 458 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 BHLHA9Q7RTU4 235 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 SLC41A1Q8IVJ1 513 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 DPF3Q92784 378 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 SLCO4A1Q96BD0 722 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 NPAS2Q99743 824 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 TUBA8Q9NY65 449 aaPredicted RBP18.19■□□□□ 0.5
SSR4-209ENST00000482902 ZDHHC2Q9UIJ5 367 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 HTR3EA5X5Y0 456 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 HHLA1C9JL84 531 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 AP3B1O00203 1094 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 GRID2O43424 1007 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 E2F6O75461 281 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 DDHD2O94830 711 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 AHSGP02765 367 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 SLC35E2BP0CK96 405 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 ADSLP30566 484 aaPredicted RBP18.19■□□□□ 0.5
SSR4-209ENST00000482902 RXRGP48443 463 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 NSUN2Q08J23 767 aaKnown RBP eCLIP18.19■□□□□ 0.5
SSR4-209ENST00000482902 PRKAA1Q13131 559 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 SLC12A1Q13621 1099 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 PTK2BQ14289 1009 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 NHSL2Q5HYW2 709 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 LINC00523Q86TU6 105 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 TLK2Q86UE8 772 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 CENPSQ8N2Z9 138 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 SPATA22Q8NHS9 363 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 BRI3BPQ8WY22 251 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 RNF34Q969K3 372 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 MARK4Q96L34 752 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 CIB1Q99828 191 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 RHOBTB2Q9BYZ6 727 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 TRPV6Q9H1D0 765 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 SUCOQ9UBS9 1254 aaKnown RBP18.19■□□□□ 0.5
SSR4-209ENST00000482902 SLC45A1Q9Y2W3 748 aa18.19■□□□□ 0.5
SSR4-209ENST00000482902 A0A087WXM4 84 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 ZBTB11O95625 1053 aaPredicted RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 STAMBPO95630 424 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 PRKAA2P54646 552 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 CCDC92Q53HC0 331 aaPredicted RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 NANOGP8Q6NSW7 305 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 HMBOX1Q6NT76 420 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 TMEM53Q6P2H8 277 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 TAC4Q86UU9 113 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 FSTL5Q8N475 847 aaPredicted RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 ADAMTS16Q8TE57 1224 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 STYXQ8WUJ0 223 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 UHRF1Q96T88 793 aaPredicted RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 RPF2Q9H7B2 306 aaKnown RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 K7EPI3 171 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 DFFAO00273 331 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 PSMD3O43242 534 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 ZNF24P17028 368 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 HK2P52789 917 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 C21orf59P57076 290 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 RHDQ02161 417 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 PM20D1Q6GTS8 502 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 PKN3Q6P5Z2 889 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 CENPLQ8N0S6 344 aaPredicted RBP18.18■□□□□ 0.5
SSR4-209ENST00000482902 TMEM86AQ8N2M4 240 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 PCDHAC1Q9H158 963 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 ZNF408Q9H9D4 720 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 SNX13Q9Y5W8 968 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 PTCH2Q9Y6C5 1203 aa18.18■□□□□ 0.5
SSR4-209ENST00000482902 SOBPA7XYQ1 873 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 H3BMQ9 156 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 MT-CYBP00156 380 aaPredicted RBP18.17■□□□□ 0.5
SSR4-209ENST00000482902 MYL3P08590 195 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 DNAJB2P25686 324 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 CLCNKBP51801 687 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 AFF1P51825 1210 aaKnown RBP18.17■□□□□ 0.5
SSR4-209ENST00000482902 MPP1Q00013 466 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 TRIM25Q14258 630 aaKnown RBP18.17■□□□□ 0.5
SSR4-209ENST00000482902 ZNF460Q14592 562 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 POU6F1Q14863 301 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 PCID2Q5JVF3 399 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 NXNQ6DKJ4 435 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 OGFOD2Q6N063 350 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 LRRC8EQ6NSJ5 796 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 DENND6AQ8IWF6 608 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 THAP11Q96EK4 314 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 COG8Q96MW5 612 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 DOK1Q99704 481 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 TBL1YQ9BQ87 522 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 ADA2Q9NZK5 511 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 XPR1Q9UBH6 696 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 CDYLQ9Y232 598 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 ACOT9Q9Y305 439 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 AAR2Q9Y312 384 aaKnown RBP18.17■□□□□ 0.5
SSR4-209ENST00000482902 DLX3O60479 287 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 JUNP05412 331 aaKnown RBP18.17■□□□□ 0.5
SSR4-209ENST00000482902 CD247P20963 164 aa18.17■□□□□ 0.5
SSR4-209ENST00000482902 PSMD8P48556 350 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms