RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 AOC1P19801 751 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 COL9A1P20849 921 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 ADCY8P40145 1251 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 BASP1P80723 227 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 BCL2L1Q07817 233 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 MTAPQ13126 283 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 LAMB3Q13751 1172 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 GRM3Q14832 879 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 ARSIQ5FYB1 569 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 FAXCQ5TGI0 409 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 C8orf74Q6P047 294 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 PACS1Q6VY07 963 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 DSG4Q86SJ6 1040 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 PRPF39Q86UA1 669 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 CAMK1DQ8IU85 385 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 MMAAQ8IVH4 418 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 CCHCR1Q8TD31 782 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 SREK1Q8WXA9 508 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 TUBGCP5Q96RT8 1024 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 LRRC1Q9BTT6 524 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 EPHX3Q9H6B9 360 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 ATP13A3Q9H7F0 1226 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 ETNK1Q9HBU6 452 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 RAB6BQ9NRW1 208 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 ASIC3Q9UHC3 531 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 AAR2Q9Y312 384 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 PCDHGC4Q9Y5F7 938 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 FAM25EA8MYX2 175 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 ALOX15BO15296 676 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 ANXA9O76027 345 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PIGNO95427 931 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PRNPP04156 253 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PYGLP06737 847 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 CTSLP07711 333 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 MMP2P08253 660 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SERPINA4P29622 427 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 FDFT1P37268 417 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 CLCN5P51795 746 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 DGKEP52429 567 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PTK6Q13882 451 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 TMPRSS6Q8IU80 811 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PAF1Q8N7H5 531 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 TMIEQ8NEW7 156 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 OR2T3Q8NH03 318 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PDCD6IPQ8WUM4 868 aaKnown RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 LRIG1Q96JA1 1093 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 NSMCE3Q96MG7 304 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PPP1R2P1Q96PQ5 205 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SH3GL1Q99961 368 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 TRIM51Q9BSJ1 452 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 MKRN2Q9H000 416 aaKnown RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 FBRSQ9HAH7 460 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 POLMQ9NP87 494 aaPredicted RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 VPS45Q9NRW7 570 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 C2orf42Q9NWW7 574 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 FAM153AQ9UHL3 310 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PPM1HQ9ULR3 514 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 WASF2Q9Y6W5 498 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 TCRBV21S2A2A0A5A6 115 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 E7EVH7 732 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 KPNA3O00505 521 aaPredicted RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 PMPCBO75439 489 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 UGT2B4P06133 528 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 GCKP35557 465 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PSMD7P51665 324 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 COPAP53621 1224 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 GEMP55040 296 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SKOR1P84550 965 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 MPP3Q13368 585 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 IHHQ14623 411 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PCSK7Q16549 785 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SYCP2LQ5T4T6 812 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 GDPD4Q6W3E5 623 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 CACUL1Q86Y37 369 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 ARL10Q8N8L6 244 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SMYD1Q8NB12 490 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 LRRN4CLQ8ND94 238 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 PIP4K2CQ8TBX8 421 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 OXNAD1Q96HP4 312 aaPredicted RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 ZNF641Q96N77 438 aaPredicted RBP11.68□□□□□ -0.54
HPS4-212ENST00000481910 GORASP1Q9BQQ3 440 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 TRIM31Q9BZY9 425 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SUV39H2Q9H5I1 410 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 CD248Q9HCU0 757 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 DLGAP2Q9P1A6 1054 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 SARDHQ9UL12 918 aa11.68□□□□□ -0.54
HPS4-212ENST00000481910 BDP1A6H8Y1 2624 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 EFCAB8A8MWE9 144 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 C1QTNF3-AMACRE9PGA6 284 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 AHCYL1O43865 530 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 APRTP07741 180 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 CXCL12P48061 93 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 LMAN1P49257 510 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 CNGA3Q16281 694 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 POM121L1PQ3SYA9 428 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms