RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 USP12O75317 370 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 MMP12P39900 470 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 ABCG1P45844 678 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 SCNN1BP51168 640 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 MAXP61244 160 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 SLC10A7Q0GE19 358 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 RALGDSQ12967 914 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 DPYSQ14117 519 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 LRRC14Q15048 493 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 SOWAHCQ53LP3 525 aaPredicted RBP17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 AFMIDQ63HM1 303 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 SFTPA2Q8IWL1 248 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 SLC35F3Q8IY50 421 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 FAM174AQ8TBP5 190 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 LRRN4Q8WUT4 740 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 ABCG4Q9H172 646 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 MRPL40Q9NQ50 206 aaKnown RBP17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 GULP1Q9UBP9 304 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 SMG1Q96Q15 3661 aaKnown RBP17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 TSPAN11A1L157 253 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 MAP3K6O95382 1288 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 CDK4P11802 303 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 GZMAP12544 262 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 E2F1Q01094 437 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 MMRN1Q13201 1228 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 RTP5Q14D33 572 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 ALG11Q2TAA5 492 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 CDCP2Q5VXM1 449 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 DENND2CQ68D51 928 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 ZCCHC8Q6NZY4 707 aaKnown RBP17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 FOXR1Q6PIV2 292 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 MACC1Q6ZN28 852 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 PGBD5Q8N414 524 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 PDCD6IPQ8WUM4 868 aaKnown RBP17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 ASB12Q8WXK4 309 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 PDXPQ96GD0 296 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 APOOQ9BUR5 198 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 DUSP23Q9BVJ7 150 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 SLC13A1Q9BZW2 595 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 NRSN2Q9GZP1 204 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 ISCUQ9H1K1 167 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 SPASTQ9UBP0 616 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 ATP8A1Q9Y2Q0 1164 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 SCINQ9Y6U3 715 aa17.51■□□□□ 0.39
ECHDC1-216ENST00000479525 A0A087WV48 116 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 A0A1W2PNU3 283 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 YY2O15391 372 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 RARAP10276 462 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 GM2AP17900 193 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 GABREP78334 506 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 PPARDQ03181 441 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 BCL2L1Q07817 233 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 ELP6Q0PNE2 266 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 PTK2BQ14289 1009 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 C3orf38Q5JPI3 329 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 IGSF10Q6WRI0 2623 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 FAM181AQ8N9Y4 354 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 PCDH19Q8TAB3 1148 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 ARHGEF17Q96PE2 2063 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 SMIM14Q96QK8 99 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 ATP13A3Q9H7F0 1226 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 SCUBE2Q9NQ36 999 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 ANAPC7Q9UJX3 599 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 PCDHGC4Q9Y5F7 938 aa17.5■□□□□ 0.39
ECHDC1-216ENST00000479525 A0A087X0T9 212 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 ANXA6P08133 673 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 CD48P09326 243 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 FAM228BP0C875 321 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 SERPINA4P29622 427 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 HTR7P34969 479 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 PBX1P40424 430 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 SSR1P43307 286 aaKnown RBP17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 UBASH3AP57075 661 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 IL10RBQ08334 325 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 LBRQ14739 615 aaKnown RBP17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 NR0B2Q15466 257 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 PPP1R2P3Q6NXS1 205 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 ERAP2Q6P179 960 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 LIPIQ6XZB0 460 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 KYQ8NBH2 561 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 FNIP1Q8TF40 1166 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 ATXN7L3BQ96GX2 97 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 CSPG4P5Q96PW8 444 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 NUP85Q9BW27 656 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 C1QTNF7Q9BXJ2 289 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 RABGEF1Q9UJ41 708 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 DOLKQ9UPQ8 538 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 CSNK1G3Q9Y6M4 447 aa17.49■□□□□ 0.39
ECHDC1-216ENST00000479525 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 H3BRJ5 948 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 RECQL5O94762 991 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 PRB1P04280 392 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 ELFN1P0C7U0 828 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 CTSEP14091 401 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 DUSP3P51452 185 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms