RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 C11orf70Q9BRQ4 267 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 NAA15Q9BXJ9 866 aaKnown RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 GANQ9H2C0 597 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 RETREG1Q9H6L5 497 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 ATP13A1Q9HD20 1204 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 EVA1BQ9NVM1 165 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 DNAJC28Q9NX36 388 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 MPP6Q9NZW5 540 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 ADAM22Q9P0K1 906 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 IL36AQ9UHA7 158 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 LIMA1Q9UHB6 759 aaKnown RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 ATXN7L1Q9ULK2 861 aaPredicted RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 PCDHGA8Q9Y5G5 932 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 NBPF19A0A087WUL8 3843 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 NBASA2RRP1 2371 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 CPED1A4D0V7 1026 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 EME2A4GXA9 379 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 KLHL33A6NCF5 533 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 DRGXA6NNA5 263 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 A6NNZ2 444 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 LGALS16A8MUM7 142 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 I6L893 689 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 NEMP1O14524 444 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SMAD6O43541 496 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 SNAP91O60641 907 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 ZNF821O75541 412 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 GCATO75600 419 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 TNFSF15O95150 251 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 CSF2P04141 144 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 CYP1A1P04798 512 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 FAM87AP0C7U9 286 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SRCP12931 536 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 NME1P15531 152 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 TNFAIP3P21580 790 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 GPD1P21695 349 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 HNRNPA2B1P22626 353 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 MMP8P22894 467 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 RBMS1P29558 406 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 AKT2P31751 481 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 FLT3P36888 993 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SSR1P43307 286 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 MAPKAPK2P49137 400 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 DUSP3P51452 185 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 GNA12Q03113 381 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 RAD51Q06609 339 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 EIF2B5Q13144 721 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 QPCTQ16769 361 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 DEFB133Q30KQ1 61 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 TUBB8Q3ZCM7 444 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 MAP9Q49MG5 647 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 ALFQ53S48 1182 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 C2CD6Q53TS8 623 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 NEK5Q6P3R8 708 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 DNAJC24Q6P3W2 148 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SCYL2Q6P3W7 929 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 C22orf39Q6P5X5 142 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 DCUN1D2Q6PH85 259 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 FOXR1Q6PIV2 292 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 RBM44Q6ZP01 1051 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 STRADAQ7RTN6 431 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 PHLDB2Q86SQ0 1253 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SLC35F3Q8IY50 421 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 RBFAQ8N0V3 343 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 AOPEPQ8N6M6 819 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 PCDH20Q8N6Y1 951 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 EMC1Q8N766 993 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 PAF1Q8N7H5 531 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 OR2A12Q8NGT7 310 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SLC30A5Q8TAD4 765 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 FAM174AQ8TBP5 190 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SLC20A1Q8WUM9 679 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 HTR3CQ8WXA8 447 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 RXFP2Q8WXD0 754 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 NT5C3BQ969T7 300 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 TBC1D31Q96DN5 1066 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 IFT43Q96FT9 208 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 CABS1Q96KC9 395 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 CCNL2Q96S94 520 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 KLF6Q99612 283 aaPredicted RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 AGPAT1Q99943 283 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 CEP44Q9C0F1 390 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 ABCG4Q9H172 646 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 USP29Q9HBJ7 922 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 PPARGC1AQ9UBK2 798 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 OR12D3Q9UGF7 316 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 IPO11Q9UI26 975 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 VPS51Q9UID3 782 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 TMEM59LQ9UK28 342 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 HS3ST2Q9Y278 367 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SNX10Q9Y5X0 201 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SCN8AQ9UQD0 1980 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 NOTCH2Q04721 2471 aa6.74□□□□□ -1.33
VCP-205ENST00000479300 SPTAN1Q13813 2472 aaKnown RBP6.74□□□□□ -1.33
VCP-205ENST00000479300 TRPM6Q9BX84 2022 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 SPTY2D1-AS1A0A0U1RR47 76 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 CLEC18AA5D8T8 446 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 ZSCAN5CA6NGD5 496 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms