RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ARRDC2Q8TBH0 407 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 TFB1MQ8WVM0 346 aaKnown RBP15.59■□□□□ 0.09
C9orf3-217ENST00000479161 ALG3Q92685 438 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 RMDN1Q96DB5 314 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 IFT43Q96FT9 208 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 NSMCE3Q96MG7 304 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 SEMA3CQ99985 751 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 C1QTNF7Q9BXJ2 289 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 NT5MQ9NPB1 228 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 TRIM10Q9UDY6 481 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 SLCO1B1Q9Y6L6 691 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 A0A0U1RQJ8 604 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 TLR4O00206 839 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 YKT6O15498 198 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 OPHN1O60890 802 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 TM7SF2O76062 418 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 PGLSO95336 258 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 ADCY2Q08462 1091 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 SGCGQ13326 291 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 TEX44Q53QW1 395 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 ZSWIM9Q86XI8 627 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 NDUFAF2Q8N183 169 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 MINDY1Q8N5J2 469 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 CNTD1Q8N815 330 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 TADA1Q96BN2 335 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 CENPTQ96BT3 561 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 SCRN2Q96FV2 425 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 SLC6A18Q96N87 628 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 MCCC1Q96RQ3 725 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-217ENST00000479161 KLF6Q99612 283 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-217ENST00000479161 PCDH12Q9NPG4 1184 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 GPR27Q9NS67 375 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 DNPEPQ9ULA0 475 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 GUCA1BQ9UMX6 200 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 CAPN6Q9Y6Q1 641 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 TMEM131Q92545 1883 aa15.58■□□□□ 0.08
C9orf3-217ENST00000479161 A0A1B0GVT2 93 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 IGLON5A6NGN9 336 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 C4orf47A7E2U8 309 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 DDX3YO15523 660 aaKnown RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 PCDHGA12O60330 932 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 NEBLO76041 1014 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 MAP3K6O95382 1288 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 PAK4O96013 591 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 JCHAINP01591 159 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 WNT1P04628 370 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 PYGMP11217 842 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 CSRP1P21291 193 aaKnown RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 MAT2AP31153 395 aaKnown RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 RXRGP48443 463 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 C21orf59P57076 290 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 NXPH1P58417 271 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 MAXP61244 160 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 AP1B1Q10567 949 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 FGL2Q14314 439 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 NOMO1Q15155 1222 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 KIF19Q2TAC6 998 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 HLA-BQ31612 363 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 ARMC12Q5T9G4 340 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 KAZNQ674X7 775 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 SEL1L3Q68CR1 1132 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 NPNTQ6UXI9 565 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 KYAT3Q6YP21 454 aaKnown RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 DPPA4Q7L190 304 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 ADAT2Q7Z6V5 191 aaKnown RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 CBARPQ8N350 705 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-217ENST00000479161 TTC13Q8NBP0 860 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 TRIM58Q8NG06 486 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 CXorf40AQ8TE69 158 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 TEKT5Q96M29 485 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 FERMT1Q9BQL6 677 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 SLC25A51Q9H1U9 297 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 AASDHPPTQ9NRN7 309 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 PCDHGC4Q9Y5F7 938 aa15.57■□□□□ 0.08
C9orf3-217ENST00000479161 ARID1BQ8NFD5 2236 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-217ENST00000479161 KCNK1O00180 336 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 PSMD11O00231 422 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 WNT9AO14904 365 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 SLC31A1O15431 190 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 HLA-DQB2P05538 268 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 PECAM1P16284 738 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-217ENST00000479161 YPEL5P62699 121 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 DYNLT1P63172 113 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 TRAF2Q12933 501 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 ZBTB17Q13105 803 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 PIH1D2Q8WWB5 315 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 IMP4Q96G21 291 aaKnown RBP15.56■□□□□ 0.08
C9orf3-217ENST00000479161 KLHDC7BQ96G42 594 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 QKIQ96PU8 341 aaKnown RBP eCLIP15.56■□□□□ 0.081e-6■■■■□ 19.6
C9orf3-217ENST00000479161 ALS2CR12Q96Q35 445 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 LYSMD1Q96S90 227 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 TDRD1Q9BXT4 1180 aaKnown RBP15.56■□□□□ 0.08
C9orf3-217ENST00000479161 GAREM1Q9H706 876 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 GDF3Q9NR23 364 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 TRHDEQ9UKU6 1024 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 PPP2R2CQ9Y2T4 447 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 PCDHB9Q9Y5E1 797 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 RAI2Q9Y5P3 530 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 SNX11Q9Y5W9 270 aa15.56■□□□□ 0.08
C9orf3-217ENST00000479161 GOLGA6L9A6NEM1 432 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms