RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ZSCAN12O43309 604 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 GDF9O60383 454 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 CER1O95813 267 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 PRLRP16471 622 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 ATP5OP48047 213 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 FAM193AP78312 1265 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 OVGP1Q12889 678 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 ZBTB17Q13105 803 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.63■□□□□ 0.89
VARS-224ENST00000479051 MFSD2AQ8NA29 543 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 TTC13Q8NBP0 860 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 FAM174AQ8TBP5 190 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 ASB12Q8WXK4 309 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 AGAP3Q96P47 875 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 QKIQ96PU8 341 aaKnown RBP eCLIP20.63■□□□□ 0.89
VARS-224ENST00000479051 VAT1Q99536 393 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 FSCN3Q9NQT6 498 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 RXFP3Q9NSD7 469 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 GGT7Q9UJ14 662 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 PHTF1Q9UMS5 762 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 ANKRD6Q9Y2G4 727 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 PCDHB9Q9Y5E1 797 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 RAI2Q9Y5P3 530 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 SLCO1B1Q9Y6L6 691 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 SPINT1O43278 529 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 TM7SF2O76062 418 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 PGLSO95336 258 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 OTUD4Q01804 1114 aaKnown RBP20.62■□□□□ 0.89
VARS-224ENST00000479051 TRAF2Q12933 501 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 RSPO4Q2I0M5 234 aaPredicted RBP20.62■□□□□ 0.89
VARS-224ENST00000479051 TEX44Q53QW1 395 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 MEI1Q5TIA1 1274 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 IQCHQ86VS3 1027 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 ZSWIM9Q86XI8 627 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 CDKL3Q8IVW4 592 aaPredicted RBP20.62■□□□□ 0.89
VARS-224ENST00000479051 MINDY1Q8N5J2 469 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 ACTL9Q8TC94 416 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 WRAP53Q9BUR4 548 aaKnown RBP20.62■□□□□ 0.89
VARS-224ENST00000479051 C1QTNF2Q9BXJ5 285 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 PLXNA2O75051 1894 aa20.62■□□□□ 0.89
VARS-224ENST00000479051 TRPM6Q9BX84 2022 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 C4orf47A7E2U8 309 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 MMP20O60882 483 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 OPHN1O60890 802 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 STK10O94804 968 aaKnown RBP20.61■□□□□ 0.89
VARS-224ENST00000479051 PAK4O96013 591 aaPredicted RBP20.61■□□□□ 0.89
VARS-224ENST00000479051 CYP2A6P11509 494 aaPredicted RBP20.61■□□□□ 0.89
VARS-224ENST00000479051 ITIH2P19823 946 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 PTPN3P26045 913 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 MMP12P39900 470 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 EPHB1P54762 984 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 EIF3EP60228 445 aaKnown RBP20.61■□□□□ 0.89
VARS-224ENST00000479051 AADACL2Q6P093 401 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 USP45Q70EL2 814 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 B4GALNT4Q76KP1 1039 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 CNTD1Q8N815 330 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 DENND6BQ8NEG7 585 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 ARRDC2Q8TBH0 407 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 HTR3CQ8WXA8 447 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 NSMCE3Q96MG7 304 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 LENG8Q96PV6 779 aaPredicted RBP20.61■□□□□ 0.89
VARS-224ENST00000479051 MYOCQ99972 504 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 CEP41Q9BYV8 373 aa20.61■□□□□ 0.89
VARS-224ENST00000479051 KLHL8Q9P2G9 620 aaPredicted RBP20.61■□□□□ 0.89
VARS-224ENST00000479051 CACNA1EQ15878 2313 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 PCDH15Q96QU1 1955 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 A0A1W2PR77 199 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 CFAP69A5D8W1 941 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 FPGTO14772 594 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 SLC30A4O14863 429 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 LZTS3O60299 673 aaPredicted RBP20.6■□□□□ 0.89
VARS-224ENST00000479051 DFNA5O60443 496 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 PRKCGP05129 697 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 ELFN1P0C7U0 828 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 CD86P42081 329 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 LIG3P49916 1009 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 NIPAL4Q0D2K0 466 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 KIF19Q2TAC6 998 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 LAYNQ6UX15 382 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 DPPA4Q7L190 304 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 TMEM145Q8NBT3 493 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 KLHDC7BQ96G42 594 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 TEKT5Q96M29 485 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 HERPUD2Q9BSE4 406 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 RTKNQ9BST9 563 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 TDRD1Q9BXT4 1180 aaKnown RBP20.6■□□□□ 0.89
VARS-224ENST00000479051 SLC25A51Q9H1U9 297 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 KCNF1Q9H3M0 494 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 FZD3Q9NPG1 666 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 TRHDEQ9UKU6 1024 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 HS3ST3A1Q9Y663 406 aa20.6■□□□□ 0.89
VARS-224ENST00000479051 A6NNZ2 444 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 TLR4O00206 839 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 CDX4O14627 284 aaPredicted RBP20.59■□□□□ 0.89
VARS-224ENST00000479051 WNT9AO14904 365 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 RBP3P10745 1247 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 MSNP26038 577 aaKnown RBP20.59■□□□□ 0.89
VARS-224ENST00000479051 RPL26P61254 145 aaKnown RBP20.59■□□□□ 0.89
VARS-224ENST00000479051 CCDC173Q0VFZ6 552 aa20.59■□□□□ 0.89
VARS-224ENST00000479051 FGL2Q14314 439 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms