RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 CSPG4P5Q96PW8 444 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 CINPQ9BW66 212 aaPredicted RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 NRSN2Q9GZP1 204 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 TCEAL2Q9H3H9 227 aaPredicted RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 SP110Q9HB58 689 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 IFNKQ9P0W0 207 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SPASTQ9UBP0 616 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SEPT3Q9UH03 358 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 IP6K2Q9UHH9 426 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SALL4Q9UJQ4 1053 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 NENFQ9UMX5 172 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 ATP8A1Q9Y2Q0 1164 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 COQ6Q9Y2Z9 468 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 URB1O60287 2271 aaKnown RBP10.87□□□□□ -0.67
SEC13-214ENST00000476597 MYO1FO00160 1098 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 OPA1O60313 960 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 GCATO75600 419 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 PRKCGP05129 697 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 C6P13671 934 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 CR2P20023 1033 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 HNRNPH3P31942 346 aaKnown RBP10.87□□□□□ -0.67
SEC13-214ENST00000476597 CASP14P31944 242 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 MMP12P39900 470 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 AP1S1P61966 158 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 SEMG2Q02383 582 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 SLC25A11Q02978 314 aaKnown RBP10.87□□□□□ -0.67
SEC13-214ENST00000476597 PPARDQ03181 441 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 C1orf61Q13536 156 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 IRF4Q15306 451 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 NFKBIBQ15653 356 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 CCDC122Q5T0U0 273 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 CFAP58Q5T655 872 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 TMCO4Q5TGY1 634 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 CDCP2Q5VXM1 449 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
SEC13-214ENST00000476597 C19orf48Q6RUI8 117 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 TMCO3Q6UWJ1 677 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 MACC1Q6ZN28 852 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 PHACTR4Q8IZ21 702 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 RBFAQ8N0V3 343 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 FAM71BQ8TC56 605 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 HSPH1Q92598 858 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 NXPE2Q96DL1 559 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 IL12RB2Q99665 862 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 APOOQ9BUR5 198 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 NUP85Q9BW27 656 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 PCDH18Q9HCL0 1135 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEC13-214ENST00000476597 APOBEC3BQ9UH17 382 aaKnown RBP10.87□□□□□ -0.67
SEC13-214ENST00000476597 TRPM6Q9BX84 2022 aa10.87□□□□□ -0.67
SEC13-214ENST00000476597 ATRXP46100 2492 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 A0A087WV48 116 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 TTC24A2A3L6 582 aaPredicted RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 EME2A4GXA9 379 aaPredicted RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 LMO7DNF2Z398 122 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 YY2O15391 372 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 HTRA2O43464 458 aaPredicted RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 LZTS3O60299 673 aaPredicted RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 MAFKO60675 156 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 TSHRP16473 764 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 BLKP51451 505 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 ADKP55263 362 aaKnown RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 RALGDSQ12967 914 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 INPP5AQ14642 412 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 SKOR2Q2VWA4 1001 aaPredicted RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 DEFB133Q30KQ1 61 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 PRRT3Q5FWE3 981 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 FAXCQ5TGI0 409 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 LIPIQ6XZB0 460 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 IFI44Q8TCB0 444 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 BOCQ9BWV1 1114 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 SLC13A1Q9BZW2 595 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 XPO4Q9C0E2 1151 aaKnown RBP10.86□□□□□ -0.67
SEC13-214ENST00000476597 CLPBQ9H078 707 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 EVA1BQ9NVM1 165 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 NCKIPSDQ9NZQ3 722 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.86□□□□□ -0.671e-7■□□□□ 8.8
SEC13-214ENST00000476597 AK5Q9Y6K8 562 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 PTPRBP23467 1997 aa10.86□□□□□ -0.67
SEC13-214ENST00000476597 CACNA1GO43497 2377 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 A0A1W2PQ67 120 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 CPED1A4D0V7 1026 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 RECQL5O94762 991 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 ANXA6P08133 673 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 HOXC4P09017 264 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 GM2AP17900 193 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 HTR1BP28222 390 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 TRIM23P36406 574 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 HSPA9P38646 679 aaKnown RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 ARSEP51690 589 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 HK3P52790 923 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 CDH6P55285 790 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 MTM1Q13496 603 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms