RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RPS13P62277 151 aaKnown RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 YPEL5P62699 121 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 SLC18A2Q05940 514 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 AIMP1Q12904 312 aaKnown RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 IKQ13123 557 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 STIM1Q13586 685 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 PLEKHO1Q53GL0 409 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 DCAF6Q58WW2 860 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 TBC1D9BQ66K14 1250 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CES5AQ6NT32 575 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 TDRPQ86YL5 185 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 DDIASQ8IXT1 998 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 RNF168Q8IYW5 571 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CADM3Q8N126 398 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 SLC25A41Q8N5S1 370 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 NKAIN3Q8N8D7 197 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 SYT2Q8N9I0 419 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 VCPIP1Q96JH7 1222 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 TMEM47Q9BQJ4 181 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 MXRA8Q9BRK3 442 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CDT1Q9H211 546 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 KLK15Q9H2R5 256 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 PLEKHA4Q9H4M7 779 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 ERVMER34-1Q9H9K5 563 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 RANGRFQ9HD47 186 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 PNRC2Q9NPJ4 139 aaKnown RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 IL17RBQ9NRM6 502 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CTNNAL1Q9UBT7 734 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 SERGEFQ9UGK8 458 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 ADAM21Q9UKJ8 722 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 ADGRF5Q8IZF2 1346 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 LRRC72A6NJI9 287 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 C2CD4BA6NLJ0 364 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 AKR1B15C9JRZ8 316 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 MGST3O14880 152 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 RAMP2O60895 175 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 ATP2C2O75185 946 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 PROP1O75360 226 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 DAB1O75553 588 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 TFPIP10646 304 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 ENO3P13929 434 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 GABRB1P18505 474 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 TBXAS1P24557 533 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 RYKP34925 604 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 IRF3Q14653 427 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 PGM5Q15124 567 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 PROSER3Q2NL68 480 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 USP41Q3LFD5 358 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 ALDH1L2Q3SY69 923 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 EARS2Q5JPH6 523 aaKnown RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 C9orf152Q5JTZ5 239 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 KRT80Q6KB66 452 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 MIS18BP1Q6P0N0 1132 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 VSIG1Q86XK7 387 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 CAMK1DQ8IU85 385 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 DENND6AQ8IWF6 608 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 POGLUT1Q8NBL1 392 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 KCTD6Q8NC69 237 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 GJC3Q8NFK1 279 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 LARP4BQ92615 738 aaKnown RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 KAT2AQ92830 837 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 NELL1Q92832 810 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 MAP4K1Q92918 833 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 SLITRK1Q96PX8 696 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 PIMREGQ9BSJ6 248 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 KIFC3Q9BVG8 833 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 OR10A4Q9H209 315 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 PDZD7Q9H5P4 517 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 TASP1Q9H6P5 420 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 ZWILCHQ9H900 591 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 WDR6Q9NNW5 1121 aaKnown RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 CCDC177Q9NQR7 707 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 GIMAP2Q9UG22 337 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 NENFQ9UMX5 172 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 ERVK-11Q9UQG0 969 aa4.39□□□□□ -1.71
BRCA1-212ENST00000473961 MAGED1Q9Y5V3 778 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-212ENST00000473961 A0A087X1B8 175 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 TRBV5-7A0A0A0MS05 114 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 KIR2DS5A0A0G2JLQ3 304 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 DDTLA6NHG4 134 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 BTBD18B2RXH4 712 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 KLRF2D3W0D1 207 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 KIR2DS3K7RE56 304 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 TP73O15350 636 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 FOXN1O15353 648 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 UGDHO60701 494 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 PPFIA2O75334 1257 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 ENTPD3O75355 529 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 NKX2-2O95096 273 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 AFPP02771 609 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 HIST1H2ABP04908 130 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 ABCB1P08183 1280 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 HIST1H2ADP20671 130 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 PON1P27169 355 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 MATR3P43243 847 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 HSD17B4P51659 736 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms