RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 RANBP10Q6VN20 620 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 AFAP1L2Q8N4X5 818 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 OR9I1Q8NGQ6 314 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 FAM45AQ8TCE6 357 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 CCDC126Q96EE4 140 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 CDCA5Q96FF9 252 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 MRGPRX2Q96LB1 330 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 SLC39A8Q9C0K1 460 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 TSPYL2Q9H2G4 693 aaPredicted RBP20.58■□□□□ 0.88
FSCN1-205ENST00000473330 GALNT8Q9NY28 637 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 CROTQ9UKG9 612 aa20.58■□□□□ 0.88
FSCN1-205ENST00000473330 TANC1Q9C0D5 1861 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 PLOD2O00469 737 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 UBFD1O14562 309 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 NRP2O60462 931 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 YWHAQP27348 245 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 LHX1P48742 406 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 AGAP9Q5VTM2 703 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 KLC3Q6P597 504 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 CYHR1Q6ZMK1 362 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 DQX1Q8TE96 717 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 PHF21BQ96EK2 531 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 RANBP9Q96S59 729 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 SLC25A23Q9BV35 468 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 CAAP1Q9H8G2 361 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 GMPR2Q9P2T1 348 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 RSL24D1Q9UHA3 163 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 PTCH2Q9Y6C5 1203 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 MRPL42Q9Y6G3 142 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 MEIS3P2A8K0S8 358 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 HTRA2O43464 458 aaPredicted RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 F2P00734 622 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 LTA4HP09960 611 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 CCDC166P0CW27 439 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 NOMO2Q5JPE7 1267 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 SAMD4BQ5PRF9 694 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 PNPLA1Q8N8W4 532 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 RIN3Q8TB24 985 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 GAB3Q8WWW8 586 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 FSD1LQ9BXM9 530 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 GSTO2Q9H4Y5 243 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 NDFIP2Q9NV92 336 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 DUS2Q9NX74 493 aaKnown RBP20.57■□□□□ 0.88
FSCN1-205ENST00000473330 MYRFQ9Y2G1 1151 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 TRAF6Q9Y4K3 522 aa20.57■□□□□ 0.88
FSCN1-205ENST00000473330 TREHO43280 583 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 SRP72O76094 671 aaKnown RBP20.56■□□□□ 0.88
FSCN1-205ENST00000473330 CKMT2P17540 419 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 ADAM17P78536 824 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 HACD2Q6Y1H2 254 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 FAM110BQ8TC76 370 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 IRGQQ8WZA9 623 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 PBXIP1Q96AQ6 731 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 SMARCD1Q96GM5 515 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 MAML3Q96JK9 1138 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 SLC39A3Q9BRY0 314 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 PNPLA3Q9NST1 481 aa20.56■□□□□ 0.88
FSCN1-205ENST00000473330 RBM22Q9NW64 420 aaKnown RBP eCLIP20.56■□□□□ 0.88
FSCN1-205ENST00000473330 DYNC1LI2O43237 492 aaPredicted RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 TIPRLO75663 272 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 MT-CO1P00395 513 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 GALNT1Q10472 559 aaPredicted RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 CLEC6AQ6EIG7 209 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 TWF2Q6IBS0 349 aaKnown RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 KIAA0408Q6ZU52 694 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 LARP4Q71RC2 724 aaKnown RBP eCLIP20.55■□□□□ 0.881e-7■■■■□ 26.4
FSCN1-205ENST00000473330 DPP9Q86TI2 863 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 TMEM86AQ8N2M4 240 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 ANKRD49Q8WVL7 239 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 FBRSL1Q9HCM7 1045 aaKnown RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 CSNK1G1Q9HCP0 422 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 PCNTO95613 3336 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 ZNF839A8K0R7 811 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 FAM155AB1AL88 458 aaPredicted RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 RBP1P09455 135 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 CDK9P50750 372 aaKnown RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 SLC7A2P52569 658 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 NDST2P52849 883 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 EMP3P54852 163 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 NHSL2Q5HYW2 709 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 PITRM1Q5JRX3 1037 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 IQSEC1Q6DN90 963 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 KRT80Q6KB66 452 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 DHFR2Q86XF0 187 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 FUNDC1Q8IVP5 155 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 ANKFN1Q8N957 763 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 UBXN10Q96LJ8 280 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 ANKRD60Q9BZ19 345 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 ABHD16BQ9H3Z7 469 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 CDH9Q9ULB4 789 aa20.55■□□□□ 0.88
FSCN1-205ENST00000473330 COL4A4P53420 1690 aaPredicted RBP20.55■□□□□ 0.88
FSCN1-205ENST00000473330 ATP6AP2A0A1C7CYW4 349 aa20.54■□□□□ 0.88
FSCN1-205ENST00000473330 SOCS2O14508 198 aa20.54■□□□□ 0.88
FSCN1-205ENST00000473330 ATP6AP2O75787 350 aa20.54■□□□□ 0.88
FSCN1-205ENST00000473330 TSPAN8P19075 237 aa20.54■□□□□ 0.88
FSCN1-205ENST00000473330 LEPRP48357 1165 aaKnown RBP20.54■□□□□ 0.88
FSCN1-205ENST00000473330 CLCNKBP51801 687 aa20.54■□□□□ 0.88
FSCN1-205ENST00000473330 AFF1P51825 1210 aaKnown RBP20.54■□□□□ 0.88
FSCN1-205ENST00000473330 PRKCQQ04759 706 aa20.54■□□□□ 0.88
FSCN1-205ENST00000473330 EIF4EBP2Q13542 120 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms