RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DFFAO00273 331 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 ZSCAN12O43309 604 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 CER1O95813 267 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 MT-CO1P00395 513 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 IL1BP01584 269 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 ZNF883P0CG24 379 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 SRCP12931 536 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 NNMTP40261 264 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 CDKN2BP42772 138 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 CTSKP43235 329 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 GRIA4P48058 902 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 SERPINH1P50454 418 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 PAPOLAP51003 745 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 AFF3P51826 1226 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 ADPRHP54922 357 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 DYNLT1P63172 113 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 SERINC3Q13530 473 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 LLGL1Q15334 1064 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 PLA2G4EQ3MJ16 856 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 POM121L1PQ3SYA9 428 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 AFMIDQ63HM1 303 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 RETSATQ6NUM9 610 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 TMEM214Q6NUQ4 689 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 LEKR1Q6ZMV7 388 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 ARHGAP36Q6ZRI8 547 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 VSIG1Q86XK7 387 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 MARCH9Q86YJ5 346 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 RFX6Q8HWS3 928 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 REXO1L1PQ8IX06 675 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 SH2D3CQ8N5H7 860 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 LZTR1Q8N653 840 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 EXD1Q8NHP7 514 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 SETD7Q8WTS6 366 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 ALG3Q92685 438 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 RBM41Q96IZ5 413 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 OMDQ99983 421 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 CAAP1Q9H8G2 361 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 TRMT1Q9NXH9 659 aaKnown RBP9.27□□□□□ -0.93
SMC4-213ENST00000472282 FZD4Q9ULV1 537 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 SCML1Q9UN30 329 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 HS3ST2Q9Y278 367 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 NCKAP1Q9Y2A7 1128 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 NEUROG3Q9Y4Z2 214 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 PCDHA3Q9Y5H8 950 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMC4-213ENST00000472282 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 ADAMTS20P59510 1910 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 AKAP13Q12802 2813 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ARID1BQ8NFD5 2236 aaPredicted RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 hCG_1818297A0A087WSY0 165 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 A0A1W2PR77 199 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 FAM221BA6H8Z2 402 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ZSCAN5CA6NGD5 496 aaPredicted RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 USP27XA6NNY8 438 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 MIF4GDA9UHW6 222 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 APOL1O14791 398 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 DDX3YO15523 660 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 SMAD6O43541 496 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 KDELR3O43731 214 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ATP9BO43861 1147 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 BNIP3LO60238 219 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 RNASEH1O60930 286 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC4-213ENST00000472282 CD160O95971 181 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 CAPNS1P04632 268 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 CTSLP07711 333 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ATXN1LP0C7T5 689 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 KRT10P13645 584 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 C5AR1P21730 350 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 PEX5P50542 639 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 RWDD2BP57060 319 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 GBE1Q04446 702 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ELAVL3Q14576 367 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 PAFAH1B3Q15102 231 aaKnown RBP9.26□□□□□ -0.93
SMC4-213ENST00000472282 SHBQ15464 509 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 DLG2Q15700 870 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 TAZQ16635 292 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ZNF423Q2M1K9 1284 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ACCSLQ4AC99 568 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 TFDP3Q5H9I0 405 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 KAZNQ674X7 775 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 C22orf39Q6P5X5 142 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 IL27RAQ6UWB1 636 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 GLRX5Q86SX6 157 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 GATAD2AQ86YP4 633 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ATPAF2Q8N5M1 289 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 UBL4BQ8N7F7 174 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 PLD5Q8N7P1 536 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 ATP11CQ8NB49 1132 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 TRIM58Q8NG06 486 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 OR2T34Q8NGX1 318 aa9.26□□□□□ -0.93
SMC4-213ENST00000472282 OR14C36Q8NHC7 312 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms