RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PLD5Q8N7P1 536 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 DENND6BQ8NEG7 585 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 BAHD1Q8TBE0 780 aaPredicted RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 CXorf40AQ8TE69 158 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 SETD7Q8WTS6 366 aaKnown RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 ASB12Q8WXK4 309 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 KLHDC7BQ96G42 594 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 NUDCD1Q96RS6 583 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 KLF6Q99612 283 aaPredicted RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 GOLPH3Q9H4A6 298 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 PCDH12Q9NPG4 1184 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 TSR3Q9UJK0 312 aaKnown RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 BTBD3Q9Y2F9 522 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 ATP8A1Q9Y2Q0 1164 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 REXO2Q9Y3B8 237 aaKnown RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 PTPRBP23467 1997 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 TTC24A2A3L6 582 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 TRAFD1O14545 582 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 PSTPIP1O43586 416 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 PAK4O96013 591 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 TNNT1P13805 278 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 EPHA8P29322 1005 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 PMLP29590 882 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 MMP12P39900 470 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 ARRB1P49407 418 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 MAXP61244 160 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 SIM1P81133 766 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 SGCGQ13326 291 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 SUZ12Q15022 739 aaKnown RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 IFI16Q16666 785 aaKnown RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 MARC1Q5VT66 337 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 SLC9A4Q6AI14 798 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 TIGD7Q6NT04 549 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 C11orf63Q6NUN7 778 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 TMEM139Q8IV31 216 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 SLC22A18ASQ8N1D0 253 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 TEX26Q8N6G2 289 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 OR13H1Q8NG92 308 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 FAM174AQ8TBP5 190 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 MAML1Q92585 1016 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 FATE1Q969F0 183 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 HDAC11Q96DB2 347 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 LENG8Q96PV6 779 aaPredicted RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 WRAP53Q9BUR4 548 aaKnown RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 GPR27Q9NS67 375 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 DDX56Q9NY93 547 aaKnown RBP15.18■□□□□ 0.02
CALD1-215ENST00000472096 DTLQ9NZJ0 730 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 IMPACTQ9P2X3 320 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 SALL4Q9UJQ4 1053 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 HS3ST3A1Q9Y663 406 aa15.18■□□□□ 0.02
CALD1-215ENST00000472096 POM121BA6NF01 834 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 MMP20O60882 483 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 SOCS5O75159 536 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 TM7SF2O76062 418 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 PRKCGP05129 697 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 MX2P20592 715 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 CCNCP24863 283 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 IGFALSP35858 605 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 GRK6P43250 576 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 RXRGP48443 463 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 GUCA2AQ02747 115 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 SLC10A2Q12908 348 aaPredicted RBP15.17■□□□□ 0.02
CALD1-215ENST00000472096 TRIP6Q15654 476 aaKnown RBP15.17■□□□□ 0.02
CALD1-215ENST00000472096 INAVAQ3KP66 663 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 RALGPS1Q5JS13 557 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 ERAP2Q6P179 960 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 GATAD2AQ86YP4 633 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 SPC24Q8NBT2 197 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 ACRBPQ8NEB7 543 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
CALD1-215ENST00000472096 SAP25Q8TEE9 199 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 BMFQ96LC9 184 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 ZNF830Q96NB3 372 aaPredicted RBP15.17■□□□□ 0.02
CALD1-215ENST00000472096 TSGA13Q96PP4 275 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 BAG1Q99933 345 aaPredicted RBP15.17■□□□□ 0.02
CALD1-215ENST00000472096 NOD2Q9HC29 1040 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 NT5MQ9NPB1 228 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 PCDHB9Q9Y5E1 797 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 ALG6Q9Y672 507 aa15.17■□□□□ 0.02
CALD1-215ENST00000472096 FPGTO14772 594 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 APOL1O14791 398 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 MATN3O15232 486 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 HTRA2O43464 458 aaPredicted RBP15.16■□□□□ 0.02
CALD1-215ENST00000472096 C6P13671 934 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 TRAF2Q12933 501 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 RALGDSQ12967 914 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 ODF2Q5BJF6 829 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 MFSD7Q6UXD7 560 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 THSD4Q6ZMP0 1018 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 Q6ZSR6 202 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 GLRX5Q86SX6 157 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 RFX6Q8HWS3 928 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 PAF1Q8N7H5 531 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 TPCN2Q8NHX9 752 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 RHBDD1Q8TEB9 315 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 LRRN4Q8WUT4 740 aa15.16■□□□□ 0.02
CALD1-215ENST00000472096 CENPTQ96BT3 561 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms