RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HNRNPCL3B7ZW38 293 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 P2RY10O00398 339 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 FGF17O60258 216 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 CEP104O60308 925 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 HNRNPCL1O60812 293 aaKnown RBP4.7□□□□□ -1.66
CD46-213ENST00000471987 ATP1A1P05023 1023 aaKnown RBP4.7□□□□□ -1.66
CD46-213ENST00000471987 HNRNPCL4P0DMR1 293 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 CETPP11597 493 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 SRCP12931 536 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 CD58P19256 250 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 RXRAP19793 462 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 CRIP2P52943 208 aaPredicted RBP4.7□□□□□ -1.66
CD46-213ENST00000471987 YWHAZP63104 245 aaKnown RBP4.7□□□□□ -1.66
CD46-213ENST00000471987 SOWAHAQ2M3V2 549 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 ADCK5Q3MIX3 580 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 CCDC174Q6PII3 467 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 TBC1D26Q86UD7 250 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 SPICE1Q8N0Z3 855 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 PARP16Q8N5Y8 322 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 GJC3Q8NFK1 279 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 LRRC8CQ8TDW0 803 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 DUX3Q96PT4 197 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 FAM167BQ9BTA0 163 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 STN1Q9H668 368 aaKnown RBP4.7□□□□□ -1.66
CD46-213ENST00000471987 NOD2Q9HC29 1040 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 KLRF2D3W0D1 207 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 RFPL2O75678 378 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 PAK4O96013 591 aaPredicted RBP4.69□□□□□ -1.66
CD46-213ENST00000471987 SERPINB2P05120 415 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 GM2AP17900 193 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 CHATP28329 748 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 HNRNPH1P31943 449 aaKnown RBP4.69□□□□□ -1.66
CD46-213ENST00000471987 STX2P32856 288 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 NR1H2P55055 460 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 UBE4AQ14139 1066 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 MORC3Q14149 939 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 POSTNQ15063 836 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 CEP70Q8NHQ1 597 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 SNAPC3Q92966 411 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 USP13Q92995 863 aaPredicted RBP4.69□□□□□ -1.66
CD46-213ENST00000471987 ERGIC1Q969X5 290 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 FBXO17Q96EF6 278 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 TMEM19Q96HH6 336 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 CLSTN3Q9BQT9 956 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 LMAN2LQ9H0V9 348 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 CGNL1Q0VF96 1302 aa4.69□□□□□ -1.66
CD46-213ENST00000471987 A0A0U1RQF3 1178 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 HSPB2A8KAH6 182 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 MID1O15344 667 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 NDUFS7O75251 213 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 CHKAP35790 457 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 BRWD1-AS2P59051 145 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 NEDD9Q14511 834 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 EFNB3Q15768 340 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 HSPB2Q16082 182 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 CCNI2Q6ZMN8 369 aaPredicted RBP4.68□□□□□ -1.66
CD46-213ENST00000471987 MARK2Q7KZI7 788 aaKnown RBP4.68□□□□□ -1.66
CD46-213ENST00000471987 MOGAT3Q86VF5 341 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 SPPL3Q8TCT6 385 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 ZC3HAV1LQ96H79 300 aaKnown RBP4.68□□□□□ -1.66
CD46-213ENST00000471987 CD180Q99467 661 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.68□□□□□ -1.66
CD46-213ENST00000471987 EPHX3Q9H6B9 360 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 TAGLN3Q9UI15 199 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 GAB2Q9UQC2 676 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 TCF19Q9Y242 345 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 A3GALT2U3KPV4 340 aa4.68□□□□□ -1.66
CD46-213ENST00000471987 hCG_1642624A0A1W2PR95 340 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 ZNF587BE7ETH6 402 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 FAM72CH0Y354 149 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 C16orf97H3BN30 126 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 PEX12O00623 359 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 SOCS6O14544 535 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 PER2O15055 1255 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 SLC2A4P14672 509 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 ITGAXP20702 1163 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 IL15P40933 162 aaPredicted RBP4.67□□□□□ -1.66
CD46-213ENST00000471987 FUT6P51993 359 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 TBL3Q12788 808 aaKnown RBP4.67□□□□□ -1.66
CD46-213ENST00000471987 ITGADQ13349 1161 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 ANKRD1Q15327 319 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 PDCD2Q16342 344 aaPredicted RBP4.67□□□□□ -1.66
CD46-213ENST00000471987 TUBB8Q3ZCM7 444 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 FAM72AQ5TYM5 149 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 ANKRD45Q5TZF3 282 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 FAM72DQ6L9T8 149 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 C17orf99Q6UX52 265 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 KRBA2Q6ZNG9 492 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 MOB3CQ70IA8 216 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 SATL1Q86VE3 508 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 FAM72BQ86X60 149 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 KBTBD3Q8NAB2 608 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 USP38Q8NB14 1042 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 SPATA22Q8NHS9 363 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 TTC14Q96N46 770 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 SLC32A1Q9H598 525 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 LRRC4Q9HBW1 653 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 SMYD2Q9NRG4 433 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 ZFP57Q9NU63 452 aa4.67□□□□□ -1.66
CD46-213ENST00000471987 ALKBH4Q9NXW9 302 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms