RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TSPAN17Q96FV3 270 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 C1orf74Q96LT6 269 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 UNKQ9C0B0 810 aaKnown RBP13.74□□□□□ -0.21
BRCA1-209ENST00000470026 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 GSTO2Q9H4Y5 243 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 GTSE1Q9NYZ3 720 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 DSEQ9UL01 958 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 TCRBV3S1A0A5B6 114 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 E9PAM4 449 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 PSMD12O00232 456 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 UBDO15205 165 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF623O75123 536 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 PGM3O95394 542 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 CLPTM1O96005 669 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 FASTKQ14296 549 aaKnown RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 FAM45BPQ6NSW5 357 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 SPATA24Q86W54 205 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 METTL23Q86XA0 190 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 METTL25Q8N6Q8 603 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 OR13J1Q8NGT2 312 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 GABPB2Q8TAK5 448 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 FAM45AQ8TCE6 357 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 TADA1Q96BN2 335 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 L3HYPDHQ96EM0 354 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF597Q96LX8 424 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 SENP6Q9GZR1 1112 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 PTTG2Q9NZH5 202 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 HS3ST4Q9Y661 456 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 MROH6A6NGR9 719 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 M0QZ92 97 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 SLC7A4O43246 635 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 IMPDH1P20839 514 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ACADVLP49748 655 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 PGFP49763 221 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 MLLT6P55198 1093 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 NFKB2Q00653 900 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 MAPRE1Q15691 268 aaKnown RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 FSCN1Q16658 493 aaKnown RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 HECTD2Q5U5R9 776 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 IL23RQ5VWK5 629 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 BORAQ6PGQ7 559 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 PAOXQ6QHF9 649 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 LARP4Q71RC2 724 aaKnown RBP eCLIP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 C14orf80Q86SX3 495 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 CHERPQ8IWX8 916 aaKnown RBP13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF683Q8IZ20 524 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 UMODL1-AS1Q8N2C9 162 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 RIN3Q8TB24 985 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ATP6V1E2Q96A05 226 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 NDNQ99608 321 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 ATXN3LQ9H3M9 355 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 TMEM181Q9P2C4 612 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 SFMBT1Q9UHJ3 866 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 MIA3Q5JRA6 1907 aa13.73□□□□□ -0.21
BRCA1-209ENST00000470026 MSI1O43347 362 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 CHRNA1P02708 482 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 FAM58BPP0C7Q3 252 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 ETS2P15036 469 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 BRCC3P46736 316 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SLC5A3P53794 718 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 TXNL4AP83876 142 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 MGAT3Q09327 533 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SEPT6Q14141 434 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 GK3PQ14409 553 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SLC5A9Q2M3M2 681 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 KLC3Q6P597 504 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 PCDH20Q8N6Y1 951 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 FAM156AQ8NDB6 213 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SLCO4A1Q96BD0 722 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SLC25A23Q9BV35 468 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 MFSD1Q9H3U5 465 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 TRPC7Q9HCX4 862 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SPAG4Q9NPE6 437 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 ADA2Q9NZK5 511 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 VWA7Q9Y334 891 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 AP4S1Q9Y587 144 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 TANC1Q9C0D5 1861 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 PRORSD1PA6NEY8 169 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 UBFD1O14562 309 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 MMP2P08253 660 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SNRPB2P08579 225 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SLC7A1P30825 629 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 NDST2P52849 883 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 ILF2Q12905 390 aaKnown RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 IHHQ14623 411 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 PPP1R3AQ16821 1122 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 NADK2Q4G0N4 442 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 AGKQ53H12 422 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms