RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CDH22Q9UJ99 828 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 PLLPQ9Y342 182 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 SLC9A3R1O14745 358 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 SIN3BO75182 1162 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 SLC4A1P02730 911 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 AHSGP02765 367 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 TAC1P20366 129 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 GABRB3P28472 473 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 VIPR2P41587 438 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 AP1S1P61966 158 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 GRM3Q14832 879 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 PPM1JQ5JR12 505 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 RALGPS1Q5JS13 557 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 COL13A1Q5TAT6 717 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 PTAR1Q7Z6K3 402 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 NAT16Q8N8M0 369 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 SPOCK2Q92563 424 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 MRPL38Q96DV4 380 aaKnown RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 RSPRY1Q96DX4 576 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 CDCA3Q99618 268 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 DZANK1Q9NVP4 752 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 EVLQ9UI08 416 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 FBXO5Q9UKT4 447 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 PAPLNO95428 1278 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 FSHRP23945 695 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 CRHR1P34998 444 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 GET4Q7L5D6 327 aaPredicted RBP18.23■□□□□ 0.51
SMC4-211ENST00000469858 GLT6D1Q7Z4J2 308 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 METTL3Q86U44 580 aaKnown RBP18.23■□□□□ 0.51
SMC4-211ENST00000469858 C2CD4AQ8NCU7 369 aaPredicted RBP18.23■□□□□ 0.51
SMC4-211ENST00000469858 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 OR13C4Q8NGS5 318 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 CALML6Q8TD86 181 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 LRRC8CQ8TDW0 803 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 PPP2R3CQ969Q6 453 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 TBATAQ96M53 351 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 NSRP1Q9H0G5 558 aaKnown RBP18.23■□□□□ 0.51
SMC4-211ENST00000469858 VPS11Q9H270 941 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 DUS2Q9NX74 493 aaKnown RBP18.23■□□□□ 0.51
SMC4-211ENST00000469858 PCDHB9Q9Y5E1 797 aa18.23■□□□□ 0.51
SMC4-211ENST00000469858 OR51F1A6NGY5 319 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 ANKRD66B4E2M5 251 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 AURKAO14965 403 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SLC7A4O43246 635 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 CRTAMO95727 393 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 DHRS4L1P0CG22 281 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SRCP12931 536 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SAT1P21673 171 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SLC8A1P32418 973 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 GMPRP36959 345 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SF3A3Q12874 501 aaKnown RBP eCLIP18.22■□□□□ 0.513e-7■■■■■ 122.4
SMC4-211ENST00000469858 TRIM68Q6AZZ1 485 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 RYBPQ8N488 228 aaPredicted RBP18.22■□□□□ 0.51
SMC4-211ENST00000469858 EFHBQ8N7U6 833 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 ZNF557Q8N988 423 aaPredicted RBP18.22■□□□□ 0.51
SMC4-211ENST00000469858 ARMC2Q8NEN0 867 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 GABPB2Q8TAK5 448 aaPredicted RBP18.22■□□□□ 0.51
SMC4-211ENST00000469858 FGF13Q92913 245 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 PEX13Q92968 403 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 ISL2Q96A47 359 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 GPR22Q99680 433 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SUDS3Q9H7L9 328 aaPredicted RBP18.22■□□□□ 0.51
SMC4-211ENST00000469858 SLC25A13Q9UJS0 675 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 SLC39A10Q9ULF5 831 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 GLRA3O75311 464 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 ZNF821O75541 412 aaPredicted RBP18.22■□□□□ 0.51
SMC4-211ENST00000469858 PIGNO95427 931 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 GLP2RO95838 553 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 IGSF6O95976 241 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 GKP32189 559 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 MAGEA12P43365 314 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 EPHB1P54762 984 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 ACVR1Q04771 509 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 DLG2Q15700 870 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 FAM78AQ5JUQ0 283 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 DGKKQ5KSL6 1271 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 FAM47EQ6ZV65 393 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 CAMK1DQ8IU85 385 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 MDGA1Q8NFP4 955 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 STYXQ8WUJ0 223 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 MFSD1Q9H3U5 465 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 FBXO6Q9NRD1 293 aaPredicted RBP18.22■□□□□ 0.51
SMC4-211ENST00000469858 MARK1Q9P0L2 795 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 HS3ST2Q9Y278 367 aa18.22■□□□□ 0.51
SMC4-211ENST00000469858 TRIM24O15164 1050 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 LINC01565O15544 149 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 BNIP3LO60238 219 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 RPP40O75818 363 aaKnown RBP18.21■□□□□ 0.51
SMC4-211ENST00000469858 CD151P48509 253 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 SERPINB4P48594 390 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 DHCR24Q15392 516 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 TAF1AQ15573 450 aaPredicted RBP18.21■□□□□ 0.51
SMC4-211ENST00000469858 GKAP1Q5VSY0 366 aaPredicted RBP18.21■□□□□ 0.51
SMC4-211ENST00000469858 PAF1Q8N7H5 531 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 ST13P5Q8NFI4 369 aaPredicted RBP18.21■□□□□ 0.51
SMC4-211ENST00000469858 MYO19Q96H55 970 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 ASB16Q96NS5 453 aa18.21■□□□□ 0.51
SMC4-211ENST00000469858 FZD6O60353 706 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms