RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 UBTFL6P0CB48 400 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 PKNOX1P55347 436 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 PRAMEP78395 509 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 POLD3Q15054 466 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SH2D4BQ5SQS7 431 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 DENND1CQ8IV53 801 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 DCP1BQ8IZD4 617 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 PPFIBP2Q8ND30 876 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 FAM156AQ8NDB6 213 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 OR13C4Q8NGS5 318 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 HEXDCQ8WVB3 486 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 IRGQQ8WZA9 623 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 LENG8Q96PV6 779 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 PANX3Q96QZ0 392 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 HAPLN3Q96S86 360 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 OLFM1Q99784 485 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 RRN3Q9NYV6 651 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 RPL26L1Q9UNX3 145 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 TMA7Q9Y2S6 64 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 TSC2P49815 1807 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 UBA6A0AVT1 1052 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 A8MX80 341 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 STX16-NPEPL1H3BU86 382 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 DLX3O60479 287 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 SERPINA6P08185 405 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ZCCHC18P0CG32 403 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 CCDC166P0CW27 439 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 OR1D2P34982 312 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 AIF1P55008 147 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 SEMG2Q02383 582 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 TUBB3Q13509 450 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LAYNQ6UX15 382 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 PGBD5Q8N414 524 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 OR6K2Q8NGY2 324 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LZICQ8WZA0 190 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 TSPAN18Q96SJ8 248 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 RHOJQ9H4E5 214 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 RGS18Q9NS28 235 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LNPEPQ9UIQ6 1025 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 TCAF1Q9Y4C2 921 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 AK5Q9Y6K8 562 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 SF3B1O75533 1304 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■■■■■ 147.8
TOP3A-203ENST00000469739 LRRC14BA6NHZ5 514 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 BNIP3LO60238 219 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 RAMP2O60895 175 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 PSMG1O95456 288 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 IGLV3-25P01717 112 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ETS2P15036 469 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 SH3BGRP55822 239 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 GEN1Q17RS7 908 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LINC00523Q86TU6 105 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 TMPRSS6Q8IU80 811 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 RNF168Q8IYW5 571 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 EFHBQ8N7U6 833 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 DCBLD1Q8N8Z6 715 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ACMSDQ8TDX5 336 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 BCL7CQ8WUZ0 217 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ANKRD49Q8WVL7 239 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 FCRL5Q96RD9 977 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 VAT1Q99536 393 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 CENPKQ9BS16 269 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ZYG11BQ9C0D3 744 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 UPF3AQ9H1J1 476 aaKnown RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 FAM96AQ9H5X1 160 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ALG9Q9H6U8 611 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 GPAMQ9HCL2 828 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 BPIFA1Q9NP55 256 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 GIMAP2Q9UG22 337 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 NCF1BA6NI72 391 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 NCF1CA8MVU1 366 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 CBX4O00257 560 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 PPP6CO00743 305 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 CIB2O75838 187 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ENO3P13929 434 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 NCF1P14598 390 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 NUDT2P50583 147 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 COPAP53621 1224 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 GEMP55040 296 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 GSTA3Q16772 222 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LIN52Q52LA3 116 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 BRMS1LQ5PSV4 323 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 GPR158Q5T848 1215 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 KIAA1841Q6NSI8 718 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LRRC74BQ6ZQY2 392 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 LRRC8DQ7L1W4 858 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 ESAMQ96AP7 390 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 RMDN1Q96DB5 314 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 DNAJC1Q96KC8 554 aaKnown RBP9.49□□□□□ -0.89
TOP3A-203ENST00000469739 IL12RB2Q99665 862 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 KIFC1Q9BW19 673 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 POMKQ9H5K3 350 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 TNFRSF12AQ9NP84 129 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 TCF7L2Q9NQB0 619 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 PPM1HQ9ULR3 514 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 FAM50BQ9Y247 325 aa9.49□□□□□ -0.89
TOP3A-203ENST00000469739 USP34Q70CQ2 3546 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 MTMR11A4FU01 709 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ENPP3O14638 875 aa9.48□□□□□ -0.89
TOP3A-203ENST00000469739 ZNF189O75820 626 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms